MetaNetter: inference and visualization of high-resolution metabolomic networks

被引：50
|
作者：
Jourdan, Fabien [1 ]
Breitling, Rainer [2 ,3 ]
Barrett, Michael P. [4 ]
Gilbert, David [5 ]
机构：
[1] INRA, ENVT, UMR Xenobiot 1089, F-31931 Toulouse, France
[2] Univ Groningen, Groningen Bioinformat Ctr, NL-9751 NN Haren, Netherlands
[3] Univ Glasgow, Groningen Bioinformat Ctr, Glasgow G12 8QQ, Lanark, Scotland
[4] Univ Glasgow, Inst Biomed & Life Sci, Glasgow G12 8QQ, Lanark, Scotland
[5] Univ Glasgow, Bioinformat Res Ctr, Glasgow G12 8QQ, Lanark, Scotland
来源：
BIOINFORMATICS | 2008年 / 24卷 / 01期
关键词：
D O I：
10.1093/bioinformatics/btm536
中图分类号：
Q5 [生物化学];
学科分类号：
071010 ; 081704 ;
摘要：
We present a Cytoscape plugin for the inference and visualization of networks from high-resolution mass spectrometry metabolomic data. The software also provides access to basic topological analysis. This open source, multi-platform software has been successfully used to interpret metabolomic experiments and will enable others using filtered, high mass accuracy mass spectrometric data sets to build and analyse networks. Supplementary information: http://compbio.dcs.gla.ac.uk/fabien/abinitio/doc/Supplementary. pdf.
引用
收藏
页码：143 / 145
页数：3
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