Lung Ultrasound Segmentation and Adaptation Between COVID-19 and Community-Acquired Pneumonia

被引:7
|
作者
Mason, Harry [1 ,2 ]
Cristoni, Lorenzo [3 ]
Walden, Andrew [4 ]
Lazzari, Roberto [5 ]
Pulimood, Thomas [6 ,7 ]
Grandjean, Louis [8 ,9 ]
Wheeler-Kingshott, Claudia A. M. Gandini [10 ,11 ]
Hu, Yipeng [1 ,2 ]
Baum, Zachary M. C. [1 ,2 ]
机构
[1] UCL, Ctr Med Image Comp, London, England
[2] UCL, Wellcome EPSRC Ctr Surg & Intervent Sci, London, England
[3] Frimley Hlth NHS Fdn Trust, Frimley Pk Hosp, Frimley, England
[4] Royal Berkshire NHS Fdn Trust, Royal Berkshire Hosp, Reading, Berks, England
[5] Hosp La Santa Creu I St Pau, Barcelona, Spain
[6] West Suffolk NHS Fdn Trust, West Suffolk Hosp, Bury St Edmunds, Suffolk, England
[7] Univ Cambridge, Cambridge Univ Hosp, Cambridge, England
[8] Great Ormond St Childrens Hosp, NHS Fdn Trust, London, England
[9] UCL, Inst Child Hlth, London, England
[10] UCL Queen Sq Inst Neurol, NMR Res Unit, Queen Sq MS Ctr, London, England
[11] Univ Pavia, Dept Brain & Behav Sci, Pavia, Italy
来源
基金
加拿大自然科学与工程研究理事会; 英国工程与自然科学研究理事会;
关键词
Deep-learning; Segmentation; Domain adaptation; Lung ultrasound; COVID-19; Pneumonia;
D O I
10.1007/978-3-030-87583-1_5
中图分类号
TP18 [人工智能理论];
学科分类号
081104 ; 0812 ; 0835 ; 1405 ;
摘要
Lung ultrasound imaging has been shown effective in detecting typical patterns for interstitial pneumonia, as a point-of-care tool for both patients with COVID-19 and other community-acquired pneumonia (CAP). In this work, we focus on the hyperechoic B-line segmentation task. Using deep neural networks, we automatically outline the regions that are indicative of pathology-sensitive artifacts and their associated sonographic patterns. With a real-world data-scarce scenario, we investigate approaches to utilize both COVID-19 and CAP lung ultrasound data to train the networks; comparing fine-tuning and unsupervised domain adaptation. Segmenting either type of lung condition at inference may support a range of clinical applications during evolving epidemic stages, but also demonstrates value in resource-constrained clinical scenarios. Adapting real clinical data acquired from COVID-19 patients to those from CAP patients significantly improved Dice scores from 0.60 to 0.87 (p < 0.001) and from 0.43 to 0.71 (p < 0.001), on independent COVID-19 and CAP test cases, respectively. It is of practical value that the improvement was demonstrated with only a small amount of data in both training and adaptation data sets, a common constraint for deploying machine learning models in clinical practice. Interestingly, we also report that the inverse adaptation, from labelled CAP data to unlabeled COVID-19 data, did not demonstrate an improvement when tested on either condition. Furthermore, we offer a possible explanation that correlates the segmentation performance to label consistency and data domain diversity in this point-of-care lung ultrasound application.
引用
收藏
页码:45 / 53
页数:9
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