Syntheses of novel 2-oxo-1,2-dihydroquinoline derivatives: Molecular and crystal structures, spectroscopic characterizations, Hirshfeld surface analyses, molecular docking studies and density functional theory calculations

被引:9
|
作者
Filali Baba, Yassir [1 ]
Gokce, Halil [2 ]
Kandri Rodi, Youssef [1 ]
Hayani, Sonia [1 ]
Ouazzani Chahdi, Fouad [1 ]
Boukir, Abdellatif [3 ]
Jasinski, Jerry P. [4 ]
Kaur, Manpreet [4 ]
Hokelek, Tuncer [5 ]
Kheira Sebbar, Nada [6 ,7 ]
Mokhtar Essassi, El [7 ]
机构
[1] Sidi Mohamed Ben Abdellah Univ, Fac Sci & Tech, Lab Appl Organ Chem, BP 2202, Routed Imouzzer 30050, Fez, Morocco
[2] Giresun Univ, Vocat High Sch Hlth Serv, Dept Med Serv & Tech, TR-28100 Giresun, Turkey
[3] Sidi Mohamed Ben Abdellah Univ, Fac Sci & Tech, Lab Biotechnol Microbien & Mol Bioact LB2MB, BP 2202,Route Imouzzer, Fes 30050, Morocco
[4] Keene State Coll, Dept Chem, 229 Main St, Keene, NH 03435 USA
[5] Hacettepe Univ, Dept Phys, TR-06800 Ankara, Turkey
[6] Univ Ibn Zohr, Fac Sci, Lab Chim Appl & Environm, Equipe Chim Bioorgan Appl, Agadir, Morocco
[7] Mohammed V Univ Rabat, Lab Chim Organ Heterocycl, Ctr Rech Sci Medicaments, Pole Competences Pharmacochim,Fac Sci, Ave Ibn Battouta,BP 1014, Rabat, Morocco
关键词
FT-IR; INHIBITORS; QUINOLINES; DESIGN; SERIES;
D O I
10.1016/j.molstruc.2020.128461
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070304 ; 081704 ;
摘要
Sixteen new quinoline derivatives (3–18) have been synthesized through cyclocondensation, nucleophilic substitution and alkylation reactions. All the obtained compounds have been characterized using 1H-, 13C and 19F NMR spectroscopic measurements. The molecular and crystal structures of four of these compounds (10, 11, 15 and 18) have also been further examined by single crystal X-ray crystallography. The predicted spectral data were also obtained and compared to the experimental results using density functional theory (DFT). in order to understand the non-bonding intermolecular interactions in solid phase crystal packing. The closest contacts between active atoms of the four studied molecules were identified through both 2D and 3D Hirshfeld surface analyses. The different structures of the four compounds are optimized and their both energies highest occupied molecular orbitals (HOMO) and lowest unoccupied molecular orbitals (LUMO), as well as their clouds are evaluated. The obtained experimental results are correlated to the calculated ones and showed great compatibility. Finally, molecular docking studies are performed to investigate the binding patterns of the title compounds with the Protein Data Bank (PDB: 1M17) inhibitor targets and showed good insights on the possible interactions using the Auto-Dock Vina program. © 2020
引用
收藏
页数:16
相关论文
共 50 条
  • [21] Crystal structure, Hirshfeld surface analysis and density functional theory study of benzyl 2-oxo-1-(prop-2-yn-1-yl)-1,2-dihydroquinoline-4-carboxyl-ate
    Bouzian, Younos
    Chkirate, Karim
    Mague, Joel T.
    Al-Ostoot, Fares Hezam
    Ahabchane, Noureddine Hammou
    Essassi, El Mokhtar
    ACTA CRYSTALLOGRAPHICA SECTION E-CRYSTALLOGRAPHIC COMMUNICATIONS, 2021, 77 : 824 - +
  • [22] Theoretical and Experimental Investigations of N- and O-Alkylated Sulfonamides: Density Functional Theory, Hirshfeld Surface Analysis, and Molecular Docking Studies
    Danish, Muhammad
    Bibi, Ayesha
    Akhtar, Arusa
    Noreen, Nadia
    Batool, Fatima
    Zahra, Nallain
    Arshad, Muhammad Nadeem
    Asiri, Abdullah M.
    CHEMISTRYSELECT, 2022, 7 (04):
  • [23] Vibrational spectroscopic, molecular docking and density functional theory studies on 2-acetylamino-5-bromo-6-methylpyridine
    Premkumar, S.
    Rekha, T. N.
    Asath, R. Mohamed
    Mathavan, T.
    Benial, A. Milton Franklin
    EUROPEAN JOURNAL OF PHARMACEUTICAL SCIENCES, 2016, 82 : 115 - 125
  • [24] Anticancer efficacy of thiazole-naphthyl derivatives targeting DNA: Synthesis, crystal structure, density functional theory, molecular docking, and molecular dynamics studies
    Aher, Abhishek
    Bera, Pradip
    Brandao, Paula
    Sharda, Saphy
    Khatua, Sabyasachi
    Manna, Sunil Kumar
    Manhas, Anu
    Bera, Pulakesh
    INTERNATIONAL JOURNAL OF BIOLOGICAL MACROMOLECULES, 2025, 299
  • [25] Synthesis, Crystal Structures, Density Functional Theory (DFT) Calculations and Molecular Orbital Calculations of Three New Derivatives of 1-(phenylsulfonyl)indole
    Philip Z. Mannes
    Manpreet Kaur
    Evans O. Onyango
    Gordon W. Gribble
    Jerry P. Jasinski
    Journal of Chemical Crystallography, 2017, 47 : 10 - 21
  • [26] Synthesis, Crystal Structures, Density Functional Theory (DFT) Calculations and Molecular Orbital Calculations of Three New Derivatives of 1-(phenylsulfonyl)indole
    Mannes, Philip Z.
    Kaur, Manpreet
    Onyango, Evans O.
    Gribble, Gordon W.
    Jasinski, Jerry P.
    JOURNAL OF CHEMICAL CRYSTALLOGRAPHY, 2017, 47 (1-2) : 10 - 21
  • [27] Design, synthesis, molecular docking, density functional theory and antimicrobial studies of some novel benzoxazole derivatives as structural bioisosteres of nucleotides
    Erol, Meryem
    Celik, Ismail
    Temiz-Arpaci, Ozlem
    Kaynak-Onurdag, Fatma
    Okten, Suzan
    JOURNAL OF BIOMOLECULAR STRUCTURE & DYNAMICS, 2021, 39 (09): : 3080 - 3091
  • [28] Synthesis, density functional theory calculation, molecular docking studies, and evaluation of novel 5-nitrothiophene derivatives for anticancer activity
    Nuha, Demokrat
    Evren, Asaf E.
    ciyanci, Zennure S.
    Temel, Halide E.
    Akalin Ciftci, Gulsen
    Yurttas, Leyla
    ARCHIV DER PHARMAZIE, 2022, 355 (09)
  • [29] A novel manganese(II) bisthiocarbohydrazone complex: Crystal structures, Hirshfeld surface analysis, DFT and molecular docking study with SARS-CoV-2
    Hashim, K. K. Mohammed
    Manoj, E.
    Kurup, M. R. Prathapachandra
    JOURNAL OF MOLECULAR STRUCTURE, 2021, 1246 (1246)
  • [30] Vibrational, spectroscopic, molecular docking and density functional theory studies on N-(5-aminopyridin-2-yl)acetamide
    Asath, R. Mohamed
    Rekha, T. N.
    Premkumar, S.
    Mathavan, T.
    Benial, A. Milton Franklin
    JOURNAL OF MOLECULAR STRUCTURE, 2016, 1125 : 633 - 642