Selective Electrochemical Detection of SARS-CoV-2 Using Deep Learning

被引:5
|
作者
Gecgel, Ozhan [1 ]
Ramanujam, Ashwin [1 ]
Botte, Gerardine G. [1 ]
机构
[1] Texas Tech Univ, Dept Chem Engn, Chem & Electrochem Technol & Innovat CETI Lab, Lubbock, TX 79409 USA
来源
VIRUSES-BASEL | 2022年 / 14卷 / 09期
关键词
COVID-19; diagnosis; COVID deep learning; electrochemical biosensor; electrochemical SARS-CoV-2 detection; differential diagnosis;
D O I
10.3390/v14091930
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
COVID-19 has been in the headlines for the past two years. Diagnosing this infection with minimal false rates is still an issue even with the advent of multiple rapid antigen tests. Enormous data are being collected every day that could provide insight into reducing the false diagnosis. Machine learning (ML) and deep learning (DL) could be the way forward to process these data and reduce the false diagnosis rates. In this study, ML and DL approaches have been applied to the data set collected using an ultra-fast COVID-19 diagnostic sensor (UFC-19). The ability of ML and DL to specifically detect SARS-CoV-2 signals against SARS-CoV, MERS-CoV, Human CoV, and Influenza was investigated. UFC-19 is an electrochemical sensor that was used to test these virus samples and the obtained current response dataset was used to diagnose SARS-CoV-2 using different algorithms. Our results indicate that the convolution neural networks algorithm could diagnose SARS-CoV-2 samples with a sensitivity of 96.15%, specificity of 98.17%, and accuracy of 97.20%. Combining this DL model with the existing UFC-19 could selectively identify SARS-CoV-2 presence within two minutes.
引用
收藏
页数:15
相关论文
共 50 条
  • [41] Inactivating SARS-CoV-2 by electrochemical oxidation
    Tu, Yunchuan
    Tang, Wei
    Yu, Liang
    Liu, Zheyi
    Liu, Yanting
    Xia, Huicong
    Zhang, Haiwei
    Chen, Shiyun
    Wu, Jia
    Cui, Xiaoju
    Zhang, Jianan
    Wang, Fangjun
    Hu, Yangbo
    Deng, Dehui
    SCIENCE BULLETIN, 2021, 66 (07) : 720 - 726
  • [42] SARS-CoV-2 Detection Methods
    Lino, Alexandra
    Cardoso, Marita A.
    Goncalves, Helena M. R.
    Martins-Lopes, Paula
    CHEMOSENSORS, 2022, 10 (06)
  • [43] Faster detection of SARS-CoV-2
    Burgess, Kevin
    Whisenant, Jon
    CHEMISTRY & INDUSTRY, 2020, 84 (7-8) : 42 - 42
  • [44] PandoGen: Generating complete instances of future SARS-CoV-2 sequences using Deep Learning
    Ramachandran, Anand
    Lumetta, Steven S.
    Chen, Deming
    PLOS COMPUTATIONAL BIOLOGY, 2024, 20 (01)
  • [45] Rapid detection of SARS-CoV-2 using a radiolabeled antibody
    Pirovano, Giacomo
    Ordonez, Alvaro A.
    Jain, Sanjay K.
    Reiner, Thomas
    Carroll, Laurence S.
    Pillarsetty, Naga Vara Kishore
    NUCLEAR MEDICINE AND BIOLOGY, 2021, 98-99 : 69 - 75
  • [46] Using Nanomaterials for SARS-CoV-2 Sensing via Electrochemical Techniques
    Tieu, My-Van
    Le, Hien T. Ngoc
    Cho, Sungbo
    MICROMACHINES, 2023, 14 (05)
  • [47] An Electrochemical Biosensing Platform for the SARS-CoV-2 Spike Antibody Detection Based on the Functionalised SARS-CoV-2 Spike Antigen Modified Electrode
    Liv, Lokman
    Kayabay, Hilal
    CHEMISTRYSELECT, 2022, 7 (10):
  • [48] Detection of SARS-COV-2 Proteins Using an ELISA Test
    Di Domenico, Marina
    De Rosa, Alfredo
    Boccellino, Mariarosaria
    DIAGNOSTICS, 2021, 11 (04)
  • [49] Detection of SARS-CoV-2 using five primer sets
    Karagoz, Alper
    Tutun, Hidayet
    Arslantas, Tutku
    Altintas, Ozlem
    Kocak, Nadir
    Altintas, Levent
    ANKARA UNIVERSITESI VETERINER FAKULTESI DERGISI, 2021, 68 (01): : 69 - 75
  • [50] Deploying Deep Transfer Learning Models To A Web-App For Sars-Cov-2 Detection Using Chest Radiography Images
    Mahapatra, Aman Kumar
    Oza, Satyam R.
    Shankar, S.
    2021 5TH INTERNATIONAL CONFERENCE ON ELECTRICAL, ELECTRONICS, COMMUNICATION, COMPUTER TECHNOLOGIES AND OPTIMIZATION TECHNIQUES (ICEECCOT), 2021, : 137 - 144