Polymorphic microsatellite and cryptic simple repeat sequence markers in pineapples (Ananas comosus var. comosus)

被引：12

作者：

Kinsuat, M. J. ^{[1
]}

Kumar, S. V. ^{[1
]}

机构：

[1] Univ Malaysia Sabah, Biotechnol Res Inst, Kota Kinabalu 88999, Sabah, Malaysia

来源：

MOLECULAR ECOLOGY NOTES | 2007年 / 7卷 / 06期

关键词：

5' anchored PCR; Ananas comosus; heterozygosity; microsatellite; pineapple; polymorphism;

D O I：

10.1111/j.1471-8286.2007.01764.x

中图分类号：

Q5 [生物化学]; Q7 [分子生物学];

学科分类号：

071010 ; 081704 ;

摘要：

A rapid method for isolating microsatellite loci in pineapples, based on the 5'-anchored polymerase chain reaction technique, revealed 137 microsatellite loci (consisting of 62 dinucleotide, 24 trinucleotide, 49 tetranucleotide and 2 hexanucleotide repeats) and 16 cryptically simple repeat sequences. We report on the characterization of 19 polymorphic microsatellite loci and one cryptic simple repeat loci in pineapples. The number of alleles per locus ranged from two to four while the observed heterozygosity ranged from 0.1705 to 1. These markers are useful as tools for detecting levels of genetic variation in pineapple varieties for germplasm management and crossbreeding purposes.

引用

页码：1032 / 1035

页数：4

共 50 条

[21] Genetic and phenotype recovery of Ananas comosus var. MD2 in response to ionizing radiation
Siyuan Ma
Anis Norsyahira Mohd Raffi
Muhamad Afiq Rosli
Nurul Amalina Mohd Zain
Mohd Hafiz Ibrahim
Saiful Anuar Karsani
Jamilah Syafawati Yaacob
Scientific Reports, 13 (1)
[22] Screening and characterization of long noncoding RNAs involved in the albinism of Ananas comosus var. bracteatus leaves
Lin, Zhen
Xiong, Yingyuan
Xue, Yanbin
Mao, Meiqin
Xiang, Yixuan
He, Yehua
Rafique, Fatima
Hu, Hao
Liu, Jiawen
Li, Xi
Sun, Lingxia
Huang, Zhuo
Ma, Jun
PLOS ONE, 2019, 14 (11):
[23] Growth of Micropropagated Ananas comosus var. erectifolius Plantlets in Different Substrates under Screenhouse Conditions
Correia, D.
Rocha, M. V. P.
Alvez, G. C.
VI INTERNATIONAL PINEAPPLE SYMPOSIUM, 2009, 822 : 85 - 89
[24] Magnesium Oxide nanoparticle effect on the growth, development, and microRNAs expression of Ananas comosus var. bracteatus
Owusu Adjei, Mark
Zhou, Xuzixin
Mao, Meiqin
Xue, Yanbin
Liu, Jiawen
Hu, Hao
Luo, Jiaheng
Zhang, Huiling
Yang, Wei
Feng, Lijun
Ma, Jun
JOURNAL OF PLANT INTERACTIONS, 2021, 16 (01) : 247 - 257
[25] Physiological Characterization and Comparative Transcriptome Analysis of White and Green Leaves of Ananas comosus var. bracteatus
Li, Xia
Kanakala, Surapathrudu
He, Yehua
Zhong, Xiaolan
Yu, Sanmiao
Li, Ruixue
Sun, Lingxia
Ma, Jun
PLOS ONE, 2017, 12 (01):
[26] Transcriptome Sequence Analysis of an Ornamental Plant, Ananas comosus var. bracteatus, Revealed the Potential Unigenes Involved in Terpenoid and Phenylpropanoid Biosynthesis
Ma, Jun
Kanakala, S.
He, Yehua
Zhang, Junli
Zhong, Xiaolan
PLOS ONE, 2015, 10 (03):
[27] ENERGY SOURCES AFFECT IN VITRO PROPAGATION AND SUBSEQUENT ACCLIMATIZATION OF ANANAS COMOSUS, VAR. SMOOTH CAYENNE PLANTS
Mengesha, Ayelign
Ayenew, Biruk
Tadesse, Tewodros
JOURNAL OF MICROBIOLOGY BIOTECHNOLOGY AND FOOD SCIENCES, 2013, 2 (06): : 2372 - 2376
[28] Comparative transcriptomic and proteomic analyses of the green and white parts of chimeric leaves in Ananas comosus var. bracteatus
Xue, Yanbin
Ma, Jun
He, Yehua
Yu, Sanmiao
Lin, Zhen
Xiong, Yingyuan
Rafique, Fatima
Jiang, Fuxing
Sun, Lingxia
Ma, Mingdong
Zhou, Yujue
Li, Xi
Huang, Zhuo
PEERJ, 2019, 7
[29] Evaluation of genetic variability in micropropagated propagules of ornamental pineapple [Ananas comosus var. bracteatus (Lindley) Coppens and Leal] using RAPD markers
Santos, M. D. M.
Buso, G. C. S.
Torres, A. C.
GENETICS AND MOLECULAR RESEARCH, 2008, 7 (04): : 1097 - 1105
[30] In vitro shoot regeneration and analysis of biochemical, antioxidant and anticancer properties of Ananas comosus var. MD2
Halim, Nur Asniyati Abdul
Ramasamy, Sujatha
Tan, Boon Chin
Khalid, Norzulaani
Yaacob, Jamilah Syafawati
MALAYSIAN JOURNAL OF FUNDAMENTAL AND APPLIED SCIENCES, 2018, 14 (02): : 263 - 268

← 1 2 3 4 5 →