LRMP Associates With Immune Infiltrates and Acts as a Prognostic Biomarker in Lung Adenocarcinoma

被引:3
|
作者
Jin, Xin [1 ,2 ]
Chen, Liwei [3 ]
Zhou, Ning [1 ,2 ]
Ni, Hong [1 ,2 ]
Zu, Lingling [1 ,2 ]
He, Jinling [1 ,2 ]
Yang, Lingqi [1 ,2 ]
Zhu, Yifan [1 ,2 ]
Sun, Xiaoyue [1 ,2 ]
Li, Xiaojiang [3 ]
Xu, Song [1 ,2 ]
机构
[1] Tianjin Med Univ Gen Hosp, Dept Lung Canc Surg, Tianjin, Peoples R China
[2] Tianjin Med Univ Gen Hosp, Lung Canc Inst, Tianjin Key Lab Lung Canc Metastasis & Tumor Micr, Tianjin, Peoples R China
[3] Tianjin Univ Tradit Chinese Med, Dept Oncol, First Teaching Hosp, Tianjin, Peoples R China
基金
中国国家自然科学基金;
关键词
LRMP; lung adenocarcinoma; prognosis; immune infiltration; immune checkpoints (ICP); WEB SERVER; CANCER; CHECKPOINT; EXPRESSION; NIVOLUMAB; ANTIGEN; SURVIVAL; TARGET; CTLA-4; CELLS;
D O I
10.3389/fmolb.2021.711928
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Background: Lymphoid-restricted membrane protein (LRMP) is an endoplasmic reticulum-associated protein that is expressed in a developmentally regulated manner in both B and T cell lineages. However, the role of LRMP in the growth, prognosis and immune infiltration in lung adenocarcinoma (LUAD) remains unclear.Method: The expression levels of LRMP mRNA in tumor and normal tissues were analyzed using Tumor Immune Estimation Resource 2.0 (TIMER 2.0) and Gene Expression Profiling Interactive Analysis 2 (GEPIA 2). LRMP protein expression was examined using the Human Protein Atlas. In vitro experiments, including qRT-PCR Western blot and immunohistochemistry staining were also performed to investigate LRMP expression. GEPIA2 and Kaplan-Meier plotter databases were used to analyze the clinical prognostic significance of LRMP. To further confirm the underlying function of LRMP, the data were analyzed using gene set enrichment analysis. Moreover, we also constructed plasmids to overexpress LRMP and explored the effect of LRMP in A549 cell line. Additionally, Tumor Immune single-cell Hub was used to investigate the distribution of LRMP in the LUAD immune microenvironment; TIMER and CIBERSORT were used to investigate the relationships among LRMP, LRMP co-expressed genes, and tumor-infiltrating immune cells; Finally, the correlations between LRMP and immune checkpoints were analyzed using TIMER 2.0.Results: The expression of LRMP was significantly lower in LUAD tissues and cell lines. High LRMP expression is associated with a better prognosis in patients with LUAD. In vitro experimental studies demonstrated that overexpression of LRMP could decrease the proliferation, migration and invasion in A549 cells, and downregulated multiple oncogenic signaling pathways, including p-STAT3, p-PI3K-p-AKT, p-MEK and EMT pathways. GSEA results showed that immuno-related and cell adhesion pathways were enriched in samples with high LRMP expression. LRMP and its co-expressed genes were positively correlated with various tumor-infiltrating immune cells and their markers. Additionally, LRMP positively correlated with immune checkpoints.Conclusions: Our data suggest that LRMP may act as a tumor suppressor gene and indicates a better prognosis. Moreover, LRMP is associated with immune infiltrates which may be involved in immunotherapy response in LUAD. Further studies are needed to validate these findings.
引用
收藏
页数:17
相关论文
共 50 条
  • [41] CSF2RB Is a Unique Biomarker and Correlated With Immune Infiltrates in Lung Adenocarcinoma
    Zhu, Ningning
    Yang, Yueyang
    Wang, Haitong
    Tang, Peng
    Zhang, Hongdian
    Sun, Haiyan
    Gong, Lei
    Yu, Zhentao
    FRONTIERS IN ONCOLOGY, 2022, 12
  • [42] Transmembrane Protein 170B is a Prognostic Biomarker and Associated With Immune Infiltrates in Pancreatic Adenocarcinoma
    Zhang, Zilong
    Shang, Jin
    Dai, Zonglin
    Yao, Yutong
    Shi, Ying
    Zhong, Deyuan
    Liang, Yuxin
    Lai, Chunyou
    Yang, Qinyan
    Feng, Tianhang
    Huang, Xiaolun
    FRONTIERS IN GENETICS, 2022, 13
  • [43] LncRNA DIRC1 is a novel prognostic biomarker and correlated with immune infiltrates in stomach adenocarcinoma
    Lin, Yuning
    Zhang, Zhongying
    Li, Ying
    Chen, Yongquan
    Su, Meiying
    Zhao, Wenzhen
    MEDICINE, 2022, 101 (46) : E31839
  • [44] COL1A1 is a prognostic biomarker and correlated with immune infiltrates in lung cancer
    Geng, Qishun
    Shen, Zhibo
    Li, Lifeng
    Zhao, Jie
    PEERJ, 2021, 9
  • [45] DLX1 acts as a novel prognostic biomarker involved in immune cell infiltration and tumor progression in lung adenocarcinoma
    Du, Yu
    Li, Heng
    Wang, Yan
    He, Yunyan
    Li, Gaofeng
    PEERJ, 2024, 12
  • [46] MRPL12 Acts as A Novel Prognostic Biomarker Involved in Immune Cell Infiltration and Tumor Progression of Lung Adenocarcinoma
    Hu, Yangyang
    Liu, Yue
    Ma, Chenchao
    Ai, Kaixing
    INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES, 2023, 24 (03)
  • [47] Correlation between prognostic indicator AHNAK2 and immune infiltrates in lung adenocarcinoma
    Zheng, Miaosen
    Liu, Jian
    Bian, Tingting
    Liu, Lei
    Sun, Hui
    Zhou, Haomiao
    Zhao, Cui
    Yang, Zheng
    Shi, Jiahai
    Liu, Yifei
    INTERNATIONAL IMMUNOPHARMACOLOGY, 2021, 90
  • [48] PODN is a prognostic biomarker and correlated with immune infiltrates in osteosarcoma
    Feng Yao
    Zhao Feng Zhu
    Jun Wen
    Fu Yong Zhang
    Zheng Zhang
    Lun Qing Zhu
    Guang Hao Su
    Quan Wen Yuan
    Yun Fang Zhen
    Xiao Dong Wang
    Cancer Cell International, 21
  • [49] PODN is a prognostic biomarker and correlated with immune infiltrates in osteosarcoma
    Yao, Feng
    Zhu, Zhao Feng
    Wen, Jun
    Zhang, Fu Yong
    Zhang, Zheng
    Zhu, Lun Qing
    Su, Guang Hao
    Yuan, Quan Wen
    Zhen, Yun Fang
    Wang, Xiao Dong
    CANCER CELL INTERNATIONAL, 2021, 21 (01)
  • [50] ITGAL as a prognostic biomarker correlated with immune infiltrates in melanoma
    Deng, TengFei
    Wang, Chaoyong
    Gao, Cong
    Zhang, Qiang
    Guo, Jun
    FRONTIERS IN ONCOLOGY, 2023, 13