Dynamics and mechanisms of coupled protein folding and binding reactions

被引:110
|
作者
Kiefhaber, Thomas [1 ]
Bachmann, Annett [1 ]
Jensen, Kristine Steen [1 ]
机构
[1] Tech Univ Munich, Dept Chem, Munich Ctr Integrated Prot Sci, D-85747 Garching, Germany
关键词
DISPERSION NMR-SPECTROSCOPY; INTRINSICALLY DISORDERED PROTEINS; TRANSITION-STATE; CONFORMATIONAL SELECTION; CHYMOTRYPSIN INHIBITOR-2; DOMAIN; ASSOCIATION; FRAGMENTS; KINETICS; INTERMEDIATE;
D O I
10.1016/j.sbi.2011.09.010
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Protein folding coupled to binding of a specific ligand is frequently observed in biological processes. In recent years numerous studies have addressed the structural properties of the unfolded proteins in the absence of their ligands. Surprisingly few time-resolved investigations on coupled folding and binding reactions have been published up to date and the dynamics and kinetic mechanisms of these processes are still only poorly understood. Especially, it is still unsolved for most systems which conformation of the protein is recognized by the ligand (conformational selection vs. folding-after-binding) and whether the ligand influences the folding kinetics. Here we review experimental methods, kinetic models and time-resolved experimental studies of coupled folding and binding reactions.
引用
收藏
页码:21 / 29
页数:9
相关论文
共 50 条
  • [21] Protein binding and protein folding
    Nussinov, R
    ITALIAN JOURNAL OF BIOCHEMISTRY, 2000, 49 (01): : 1 - 1
  • [22] Visualization of coupled protein folding and binding in bacteria and purification of the heterodimeric complex
    Wang, HY
    Chong, SR
    PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2003, 100 (02) : 478 - 483
  • [23] MECHANISMS OF PROTEIN FOLDING
    BIRINGER, R
    FINK, A
    LUSTIG, B
    PAINTER, B
    ABSTRACTS OF PAPERS OF THE AMERICAN CHEMICAL SOCIETY, 1980, 180 (AUG): : 162 - BIOL
  • [24] INTERMEDIATES IN PROTEIN FOLDING REACTIONS AND MECHANISM OF PROTEIN FOLDING
    BALDWIN, RL
    ANNUAL REVIEW OF BIOCHEMISTRY, 1975, 44 : 453 - 475
  • [25] Mechanisms of protein folding
    Ivarsson, Ylva
    Travaglini-Allocatelli, Carlo
    Brunori, Maurizio
    Gianni, Stefano
    EUROPEAN BIOPHYSICS JOURNAL WITH BIOPHYSICS LETTERS, 2008, 37 (06): : 721 - 728
  • [26] Mechanisms of protein folding
    Ylva Ivarsson
    Carlo Travaglini-Allocatelli
    Maurizio Brunori
    Stefano Gianni
    European Biophysics Journal, 2008, 37 : 721 - 728
  • [27] Mechanisms of protein folding
    Grantcharova, V
    Alm, EJ
    Baker, D
    Horwich, AL
    CURRENT OPINION IN STRUCTURAL BIOLOGY, 2001, 11 (01) : 70 - 82
  • [28] Mechanisms of Folding upon Binding
    Clarke, Jane
    FASEB JOURNAL, 2015, 29
  • [29] Folding funnels and binding mechanisms
    Ma, BY
    Kumar, S
    Tsai, CJ
    Nussinov, R
    PROTEIN ENGINEERING, 1999, 12 (09): : 713 - 720
  • [30] Unraveling coupled folding and binding dynamics of ribonuclease S with transient infrared spectroscopy
    Lee, Yumin
    Ashwood, Brennan
    Tokmakoff, Andrei
    BIOPHYSICAL JOURNAL, 2023, 122 (03) : 546A - 546A