A Preliminary Amplified Fragment Length Polymorphism (AFLP) Primers Selection for Spathoglottis Species

被引:0
|
作者
Ginibun, F. C. [1 ]
Bhassu, S. [1 ]
Khalid, N. [1 ]
Othman, R. Y. [1 ]
Arens, P. [2 ]
Vosman, B. [2 ]
机构
[1] Univ Malaya, Fac Sci, Ctr Res Biotechnol Agr CEBAR, Unit Genet Mol Biol,Inst Biol Sci, Kuala Lumpur 50603, Malaysia
[2] Univ Wageningen & Res Ctr, Wageningen UR Plant Breeding, NL-6700 AJ Wageningen, Netherlands
来源
关键词
AFLP primer; terrestrial orchid; molecular marker;
D O I
暂无
中图分类号
Q94 [植物学];
学科分类号
071001 ;
摘要
Spathoglottis is a native terrestrial orchid that attracting horticultural interest as a landscaping plant. Distinguishing orchid at species level based on morphological characteristics is unconvincing as some characteristic may sensitive to environmental. Therefore, molecular characterization could be an alternative method in characterizing Spathoglottis species. Amplified Fragment Length Polymorphism (AFLP) marker was selected to characterize the Spathoglottis species. Among 56 AFLP primer combinations tested on Spathoglottis plicata, only eight primer combinations gave clear scorable polymorphic bands. A total of 60 accessions of Spathoglottis species, hybrid and outgroup (Dendrobium) were analysed using the eight primer combinations and generated 891 polymorphic bands with 98.41% in average. The AFLP patterns showed that the Spathoglottis species sampled were clearly different.
引用
收藏
页码:167 / 173
页数:7
相关论文
共 50 条
  • [31] Amplified Fragment Length Polymorphism (AFLP) Reveals Species-Specific Markers in the Daphnia Galeata–HyalinaSpecies Complex
    Massimiliano Gili
    Michael T. Monaghan
    Piet Spaak
    Hydrobiologia, 2004, 526 : 63 - 71
  • [32] Genetic and phylogenetic analysis of ten Gobiidae species in China based on amplified fragment length polymorphism (AFLP) analysis
    Han, Gang
    Song, Na
    Zhang, Li Yan
    Sun, Xi Fu
    Gao, Tian Xiang
    AFRICAN JOURNAL OF BIOTECHNOLOGY, 2011, 10 (51): : 10530 - 10536
  • [33] Amplified fragment length polymorphism (AFLP) in soybean: Species diversity, inheritance, and near-isogenic line analysis
    Maughan, PJ
    Maroof, MAS
    Buss, GR
    Huestis, GM
    THEORETICAL AND APPLIED GENETICS, 1996, 93 (03) : 392 - 401
  • [34] Amplified fragment length polymorphism (AFLP) reveals species-specific markers in the Daphnia galeata-hyalina species complex
    Gili, M
    Monaghan, MT
    Spaak, P
    HYDROBIOLOGIA, 2004, 526 (01) : 63 - 71
  • [35] Amplified-fragment length polymorphism fingerprinting of Mycoplasma species
    Kokotovic, B
    Friis, NF
    Jensen, JS
    Ahrens, P
    JOURNAL OF CLINICAL MICROBIOLOGY, 1999, 37 (10) : 3300 - 3307
  • [36] The use of amplified fragment length polymorphism (AFLP) in the isolation of sex-specific markers
    Griffiths, R
    Orr, K
    MOLECULAR ECOLOGY, 1999, 8 (04) : 671 - 674
  • [37] Genetical diversity of cherimoya cultivars revealed by Amplified Fragment Length Polymorphism (AFLP) analysis
    Rahman, M
    Shimada, T
    Yamamoto, T
    Yonemoto, JY
    Yoshida, M
    BREEDING SCIENCE, 1998, 48 (01) : 5 - 10
  • [38] Amplified fragment length polymorphism (AFLP) protocol for genotyping the malarial parasite Plasmodium falciparum
    Rubio, JM
    Berzosa, PJ
    Benito, A
    PARASITOLOGY, 2001, 123 : 331 - 336
  • [39] DNA fingerprinting of Cryptosporidium parvum isolates using amplified fragment length polymorphism (AFLP)
    Blears, MJ
    Pokorny, NJ
    Carreno, RA
    Chen, S
    De Grandis, SA
    Lee, H
    Trevors, JT
    JOURNAL OF PARASITOLOGY, 2000, 86 (04) : 838 - 841
  • [40] Genotyping and genetic diversity of Arcobacter butzleri by amplified fragment length polymorphism (AFLP) analysis
    On, SLW
    Atabay, HI
    Amisu, KO
    Coker, AO
    Harrington, CS
    LETTERS IN APPLIED MICROBIOLOGY, 2004, 39 (04) : 347 - 352