Applying text mining and machine learning techniques to gene clusters analysis

被引:0
|
作者
de Medeiros, DMR [1 ]
de Carvallio, ACPDLF [1 ]
机构
[1] Univ Sao Paulo, Computat Intelligence Lab, LABIC, Sao Paulo, Brazil
关键词
D O I
暂无
中图分类号
TP18 [人工智能理论];
学科分类号
081104 ; 0812 ; 0835 ; 1405 ;
摘要
Genomic data clustering has been receiving a growing attention during last years. However, finding the biological meaning of the clusters is still a manual work, which becomes very difficult as the amount of data grows. In this paper, the authors present a few experiments applying Text Mining and Machine Learning techniques to help associating meaning to genes clusters. These experiments were applied to papers abstracts and interaction database data related to Saccaromyces cerevisiae genes both for identifying texts content and for explaining the biological meaning of the genes clusters found. The results were compared to information published by experts in molecular biology and a number of relevant equivalences were found.
引用
收藏
页码:23 / 28
页数:6
相关论文
共 50 条
  • [31] Development of a Machine Learning Framework for Biomedical Text Mining
    Rodrigues, Ruben
    Costa, Hugo
    Rocha, Miguel
    10TH INTERNATIONAL CONFERENCE ON PRACTICAL APPLICATIONS OF COMPUTATIONAL BIOLOGY & BIOINFORMATICS, 2016, 477 : 41 - 49
  • [32] Genome Mining Using Machine Learning Techniques
    Wlodarczak, Peter
    Soar, Jeffrey
    Ally, Mustafa
    INCLUSIVE SMART CITIES AND E-HEALTH, 2015, 9102 : 379 - 384
  • [33] Machine Learning Techniques for Data Mining: A Survey
    Sharma, Seema
    Agrawal, Jitendra
    Agarwal, Shikha
    Sharma, Sanjeev
    2013 IEEE INTERNATIONAL CONFERENCE ON COMPUTATIONAL INTELLIGENCE AND COMPUTING RESEARCH (ICCIC), 2013, : 162 - 167
  • [34] Applying Machine Learning and Audio Analysis Techniques to Insect Recognition in Intelligent Traps
    Silva, Diego F.
    de Souza, Vinicius M. A.
    Batista, Gustavo E. A. P. A.
    Keogh, Eamonn
    Ellis, Daniel P. W.
    2013 12TH INTERNATIONAL CONFERENCE ON MACHINE LEARNING AND APPLICATIONS (ICMLA 2013), VOL 1, 2013, : 99 - 104
  • [35] Applying machine learning techniques in survival analysis to the private pension system in Turkey
    Simsek, Guven
    Karasoy, Duru
    COMMUNICATIONS IN STATISTICS-THEORY AND METHODS, 2024, 53 (16) : 5706 - 5720
  • [36] Applying Machine Learning Techniques for Sentiment Analysis in the Case Study of Indian Politics
    Patil, Annapurna P.
    Doshi, Dimple
    Dalsaniya, Darshan
    Rashmi, B. S.
    ADVANCES IN SIGNAL PROCESSING AND INTELLIGENT RECOGNITION SYSTEMS, 2018, 678 : 351 - 358
  • [37] An analysis of Chinese nursing electronic medical records to predict violence in psychiatric inpatients using text mining and machine learning techniques
    Hu, Ya-Han
    Hung, Jeng-Hsiu
    Hu, Li-Yu
    Huang, Sheng-Yun
    Shen, Cheng-Che
    PLOS ONE, 2023, 18 (06):
  • [38] On applying machine learning techniques for design pattern detection
    Zanoni, Marco
    Fontana, Francesca Arcelli
    Stella, Fabio
    JOURNAL OF SYSTEMS AND SOFTWARE, 2015, 103 : 102 - 117
  • [39] Applying machine learning techniques to automating XML markup
    Akhtar, S
    Reilly, RG
    Dunnion, J
    MLMTA'03: INTERNATIONAL CONFERENCE ON MACHINE LEARNING; MODELS, TECHNOLOGIES AND APPLICATIONS, 2003, : 56 - 61
  • [40] Applying Machine Learning Techniques to the Audit of Antimicrobial Prophylaxis
    Shi, Zhi-Yuan
    Hon, Jau-Shin
    Cheng, Chen-Yang
    Chiang, Hsiu-Tzy
    Huang, Hui-Mei
    APPLIED SCIENCES-BASEL, 2022, 12 (05):