Data on transcriptome analysis from mesocarp tissue of mango Mangifera indica 'Chokanan' fruits

被引:2
|
作者
Karim, Siti Khadijah A. [1 ]
Zaini, Mohamad Zai Mirza [2 ]
Zainal, Zamri [3 ]
机构
[1] Univ Teknol MARA UiTM Melaka, Fac Plantat & Agrotechnol, Jasin campus, Merlimau 77300, Melaka, Malaysia
[2] Univ Teknol MARA UiTM Selangor, Fac Sci Appl, Shah Alam 40450, Selangor, Malaysia
[3] Univ Kebangsaan Malaysia, Fac Sci & Technol, Dept Biol Sci & Biotechnol, Bangi, Malaysia
来源
DATA IN BRIEF | 2022年 / 42卷
关键词
Highly expressed gene; Mango; Transcriptome analysis; Fruit development;
D O I
10.1016/j.dib.2022.108160
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
Mangoes comes in different sizes and consumer are often favour those with bigger, fleshy mango. Many genes are plays an important role in determining the growth, final size and shapes of the mango. To further understand the roles of genes that play roles in fruit development, a de novo transcriptomic analysis was performed at two stages of fruit development; immature and ripening stage, using Illumina HiSeq 4000 platform with 30x sequencing coverage. A total of approximately 128 Gb of clean nucleotides was obtained from 130 Gb of raw nucletides sequenced from four fruit mesocarp of both time points. The raw and clean data were deposited into National Center for Biotechnology Information (NCBI) Sequence Read Archive (SRA) database with accession number PRJNA803945. (C) 2022 The Author(s). Published by Elsevier Inc.
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页数:4
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