Deinococcus antarcticus sp nov., isolated from soil

被引:12
|
作者
Dong, Ning [1 ,2 ]
Li, Hui-Rong [1 ]
Yuan, Meng [1 ,2 ]
Zhang, Xiao-Hua [2 ]
Yu, Yong [1 ]
机构
[1] Polar Res Inst China, SOA Key Lab Polar Sci, Shanghai 200136, Peoples R China
[2] Ocean Univ China, Coll Marine Life Sci, Qingdao 266003, Peoples R China
基金
中国国家自然科学基金;
关键词
RADIATION-RESISTANT; GEN-NOV; BACTERIUM; PEPTIDOGLYCAN;
D O I
10.1099/ijs.0.066324-0
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
A pink-pigmented, non-motile, coccoid bacterial strain, designated G3-6-20(T), was isolated from a soil sample collected in the Grove Mountains, East Antarctica. This strain was resistant to UV irradiation (810 J m(-2)) and slightly more sensitive to desiccation as compared with Deinococcus radiodurans. Phylogenetic analyses based on the 16S rRNA gene sequence of the isolate indicated that the organism belongs to the genus Deinococcus. Highest sequence similarities were with Deinococcus ficus CC-FR2-10(T) (93.5 %), Deinococcus xinjiangensis X-82(T) (92.8 %), Deinococcus indicus wt/1a(T) (92.5 %), Deinococcus daejeonensis MJ27(T) (92.3 %), Deinococcus wulumuqiensis R-12(T) (92.3 %), Deinococcus aquaticus PB314(T) (92.2%) and Deinococcus radiodurans DSM 20539(T) (92.2%). Major fatty acids were C-18:1 omega 7c, summed feature 3 (C-16:1 omega 7c and/or C-16:1 omega 6c), anteiso-C-15:0 and C-16:0. The G+C content of the genomic DNA of strain G3-6-20(T) was 63.1 mol%. Menaquinone 8 (MK-8) was the predominant respiratory quinone. Based on its phylogenetic position, and chemotaxonomic and phenotypic characteristics, strain G3-6-20(T) represents a novel species of the genus Deinococcus, for which the name Deinococcus antarcticus sp. nov. is proposed. The type strain is G3-6-20(T) (=DSM 27864(T)=CCTCC AB 2013263(T)).
引用
收藏
页码:331 / 335
页数:5
相关论文
共 50 条
  • [41] Poseidonibacter antarcticus sp. nov., isolated from Antarctic intertidal sediment
    Guo, Xiao-Han
    Wang, Ning
    Yuan, Xiao-Xue
    Zhang, Xi-Ying
    Chen, Xiu-Lan
    Zhang, Yu-Zhong
    Song, Xiao-Yan
    INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2019, 69 (09) : 2717 - 2722
  • [42] Deinococcus arcticus sp. nov., isolated from Silene acaulis rhizosphere soil of the Arctic tundra
    Wang, Xin-Peng
    Li, Chang-Ming
    Yu, Yong
    Li, Hui-Rong
    Du, Zong-Jun
    Mu, Da-Shuai
    INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2019, 69 (11) : 3437 - 3442
  • [43] Oceanicola antarcticus sp nov and Oceanicola flagellatus sp nov., moderately halophilic bacteria isolated from seawater
    Huo, Ying-Yi
    Li, Zheng-Yang
    You, Hong
    Wang, Chun-Sheng
    Post, Anton F.
    Oren, Aharon
    Xu, Xue-Wei
    INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2014, 64 : 2975 - 2979
  • [44] Deinococcus rhizophilus sp.nov., isolated from rhizosphere soil
    Gao, Fengzhi
    Li, Heng
    Tang, Kai
    Zhang, Tingting
    Bao, Runze
    Feng, Fuying
    INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2024, 74 (01)
  • [45] Deinococcus puniceus sp. nov., a Bacterium Isolated from Soil-Irradiated Gamma Radiation
    Jae-Jin Lee
    Sathiyaraj Srinivasan
    Sangyong Lim
    Minho Joe
    Seonghun Im
    Myung Kyum Kim
    Current Microbiology, 2015, 70 : 464 - 469
  • [46] Deinococcus swuensis sp. nov., a gamma-radiation-resistant bacterium isolated from soil
    Jae-Jin Lee
    Hyun Ji Lee
    Gi Seon Jang
    Ja Myoung Yu
    Ji Yoon Cha
    Su Jeong Kim
    Eun Bit Lee
    Myung Kyum Kim
    Journal of Microbiology, 2013, 51 : 305 - 311
  • [47] Deinococcus detaillensissp. nov., isolated from humus soil in Antarctica
    Zhang, Kun
    Zhu, Jing
    Li, Shuai
    Rao, Manik Prabhu Narsing
    Li, Ning-Mei
    Guo, Ang-Yang
    Jiang, Zhao
    Tang, Qi-Yong
    Wan, Yi
    Zhang, Zhi-Dong
    Li, Wen-Jun
    ARCHIVES OF MICROBIOLOGY, 2020, 202 (09) : 2493 - 2498
  • [48] Deinococcus aestuarii sp. nov. and Deinococcus aquaedulcis sp. nov., two novel resistant bacteria isolated from pearl river estuary
    Ling-Zi Yin
    Jia-Ling Li
    Ze-Tao Liu
    Bao-Zhu Fang
    Pandeng Wang
    Xiao-Qing Luo
    Lei Dong
    Li Duan
    Shan-Hui Li
    Wen-Jun Li
    Antonie van Leeuwenhoek, 2022, 115 : 59 - 68
  • [49] Deinococcus betulae sp. nov. and Deinococcus arboris sp. nov., novel bacteria isolated from bark of birch tree (Betula platyphylla)
    Bae, Seokhyeon
    Kang, Heeyoung
    Kim, Haneul
    Joh, Kiseong
    INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2022, 72 (10)
  • [50] Deinococcus aestuarii sp. nov. and Deinococcus aquaedulcis sp. nov., two novel resistant bacteria isolated from pearl river estuary
    Yin, Ling-Zi
    Li, Jia-Ling
    Liu, Ze-Tao
    Fang, Bao-Zhu
    Wang, Pandeng
    Luo, Xiao-Qing
    Dong, Lei
    Duan, Li
    Li, Shan-Hui
    Li, Wen-Jun
    ANTONIE VAN LEEUWENHOEK INTERNATIONAL JOURNAL OF GENERAL AND MOLECULAR MICROBIOLOGY, 2022, 115 (01): : 59 - 68