Characterizing the Mechanism of the Double Proton Transfer in the Formamide Dimer

被引:38
|
作者
Hargis, Jacqueline C. [1 ,2 ]
Voehringer-Martinez, Esteban [3 ]
Woodcock, H. Lee [2 ]
Toro-Labbe, Alejandro [3 ]
Schaefer, Henry F., III [1 ]
机构
[1] Univ Georgia, Ctr Computat Quantum Chem, Athens, GA 30602 USA
[2] Univ S Florida, Dept Chem, Tampa, FL 33620 USA
[3] Pontificia Univ Catolica Chile, Lab Quim Teor Computac QTC, Santiago, Chile
来源
JOURNAL OF PHYSICAL CHEMISTRY A | 2011年 / 115卷 / 12期
基金
美国国家科学基金会;
关键词
COMPLETE BASIS-SET; AB-INITIO; REACTION FORCE; GAS-PHASE; CHEMICAL-REACTIONS; QUANTUM-CHEMISTRY; N-METHYLACETAMIDE; VIBRATIONAL-MODES; HARTREE-FOCK; ENERGY;
D O I
10.1021/jp111834v
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070304 ; 081704 ;
摘要
The double proton transfer in the formamide dimer is characterized computationally by combining density functional theory and ab initio methods. The intrinsic reaction coordinate (IRC) is obtained at the B3LYP level of theory. Energies of several points along the IRC are treated by the more rigorous focal point method to test the validity of the B3LYP functional. The reaction mechanism is examined in terms of the energy profile, the reaction force, the chemical potential, and the reaction electronic flux. The energy profile for the activation process of the formamide dimer to the imino ether product obtained with the B3LYP functional is in agreement with the results of the focal point method. Together with the reaction force analysis and the reaction electronic flux a precise assignment of the structural and electronic contributions to the activation barrier becomes possible. The results show that the reaction starts with, a structural rearrangement, where the two dimers approach each other, and is followed by electronic changes before the system reaches the transition state. This electronic contribution to the activation barrier steers the activation process. After the transition state is reached, deviations of the B3LYP functional from the more accurate focal point energies become apparent, where the errors may be rationalized in terms of the treatment of exchange. The inconsistency could be assigned to the incapacity of the functional to describe delocalization effects over the whole system.
引用
收藏
页码:2650 / 2657
页数:8
相关论文
共 50 条
  • [21] Excited state double proton transfer in the 7-azaindole dimer revisited
    Folmer, DE
    Wisniewski, ES
    Castleman, AW
    CHEMICAL PHYSICS LETTERS, 2000, 318 (06) : 637 - 643
  • [22] Investigations of double proton transfer behavior between glycinamide and formamide using density functional theory
    Li, P
    Bu, YX
    JOURNAL OF PHYSICAL CHEMISTRY A, 2004, 108 (46): : 10288 - 10295
  • [23] The answer to concerted versus step-wise controversy for the double proton transfer mechanism of 7-azaindole dimer in solution
    Takeuchi, Satoshi
    Tahara, Tahei
    PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2007, 104 (13) : 5285 - 5290
  • [24] QUANTUM CHEMICAL STUDIES ON MOLECULAR MECHANISM OF MUTATIONS .2. DOUBLE PROTON-TRANSFER IN FORMIC-ACID DIMER
    SOKALSKI, WA
    ROMANOWSKI, H
    JAWORSKI, A
    ADVANCES IN MOLECULAR RELAXATION AND INTERACTION PROCESSES, 1977, 11 (1-2): : 29 - 41
  • [25] A quantitative and a qualitative study of the resonance assisted double proton transfer in formic acid dimer
    Sharan, S
    Pal, S
    Kanhere, DG
    Goursot, A
    INDIAN JOURNAL OF CHEMISTRY SECTION A-INORGANIC BIO-INORGANIC PHYSICAL THEORETICAL & ANALYTICAL CHEMISTRY, 2006, 45 (01): : 202 - 212
  • [26] Effects of external electric fields on double proton transfer kinetics in the formic acid dimer
    Arabi, Alya A.
    Matta, Cherif F.
    PHYSICAL CHEMISTRY CHEMICAL PHYSICS, 2011, 13 (30) : 13738 - 13748
  • [27] Double Proton Transfer Across a Table: The Formic Acid Dimer-Fluorobenzene Complex
    Li, Weixing
    Tikhonov, Denis S.
    Schnell, Melanie
    ANGEWANDTE CHEMIE-INTERNATIONAL EDITION, 2021, 60 (49) : 25674 - 25679
  • [28] Theoretical study for solvent effect on the potential energy surface for the double proton transfer in formic acid dimer and formamidine dimer
    Lim, JH
    Lee, EK
    Kim, Y
    JOURNAL OF PHYSICAL CHEMISTRY A, 1997, 101 (12): : 2233 - 2239
  • [29] THE CATALYTIC MECHANISM OF SERINE PROTEASES - SINGLE PROTON VERSUS DOUBLE PROTON-TRANSFER
    STAMATO, FMLG
    LONGO, E
    YOSHIOKA, LM
    FERREIRA, RC
    JOURNAL OF THEORETICAL BIOLOGY, 1984, 107 (02) : 329 - 338
  • [30] ETS-NOCV decomposition of the reaction force for double-proton transfer in formamide-derived systems
    Talaga, Piotr
    Brela, Mateusz Z.
    Michalak, Artur
    JOURNAL OF MOLECULAR MODELING, 2018, 24 (01)