Multi-omics reveals response mechanism of liver metabolism of hybrid sturgeon under ship noise stress

被引:12
|
作者
Zhang, Yong [1 ,2 ]
Liu, Chunhua [1 ,2 ]
Liu, Jiehao [1 ,2 ]
Liu, Ximei [1 ,2 ]
Tu, Zhihan [1 ,2 ]
Zheng, Yueping [3 ,4 ]
Xu, Jianan [3 ,4 ]
Fan, Houyong [3 ,4 ]
Wang, Youji [1 ,2 ]
Hu, Menghong [1 ,2 ]
机构
[1] Shanghai Ocean Univ, Key Lab Explorat & Utilizat Aquat Genet Resources, Minist Educ, Shanghai 201306, Peoples R China
[2] Shanghai Ocean Univ, Shanghai Engn Res Ctr Aquaculture, Shanghai 201306, Peoples R China
[3] Joint Lab Monitoring & Conservat Aquat Living Res, Shanghai 200092, Peoples R China
[4] Shanghai Aquat Wildlife Conservat & Res Ctr, Shanghai 200003, Peoples R China
关键词
Hybrid sturgeon; Ship noise; Transcriptome; Metabolome; Immune response; Biosynthesis; CELL-DEATH; VITAMIN-D3; EXPRESSION; ALIGNMENT; IMPACT; DNA;
D O I
10.1016/j.scitotenv.2022.158348
中图分类号
X [环境科学、安全科学];
学科分类号
08 ; 0830 ;
摘要
Underwater noise from ship engines can affect the metabolism and immune system of various fish species. Meanwhile, changes in the metabolic pathways in liver are important for fish to adapt to adverse environments. We used a com-bined multi-omics analysis to investigate the response mechanism of hybrid sturgeon to continuously played ship noise. A control group and a noise group (simulated ship noise: 12 h) were set up, and liver tissues were extracted for high-throughput transcriptome and metabolome sequencing. The results show that a total of 588 differentially expressed genes (DEGs) and 58 DEGs metabolites were detected. The joint analysis of transcriptome and metabolome showed that under noise stress, apoptosis and cell motility were intensified, DNA replication, RNA transcription and translation, and protein synthesis were inhibited, and lipid metabolism, nucleotide metabolism, and vitamin D3 met-abolic pathways were also inhibited. Interestingly, the initiation of a partial immune responses ensured their normal immunity abilities. Moreover, material and energy requirements of the organism under noise stress were guaranteed by upregulation of carbohydrate and amino acid metabolic pathways.
引用
收藏
页数:11
相关论文
共 50 条
  • [31] Systematic comparison of multi-omics survival models reveals a widespread lack of noise resistance
    Wissel, David
    Rowson, Daniel
    Boeva, Valentina
    CELL REPORTS METHODS, 2023, 3 (04):
  • [32] Multi-omics analysis reveals regulators of the response to nitrogen limitation in Yarrowia lipolytica
    Pomraning, Kyle R.
    Kim, Young-Mo
    Nicora, Carrie D.
    Chu, Rosalie K.
    Bredeweg, Erin L.
    Purvine, Samuel O.
    Hu, Dehong
    Metz, Thomas O.
    Baker, Scott E.
    BMC GENOMICS, 2016, 17
  • [33] Multi-omics analysis reveals regulators of the response to nitrogen limitation in Yarrowia lipolytica
    Kyle R. Pomraning
    Young-Mo Kim
    Carrie D. Nicora
    Rosalie K. Chu
    Erin L. Bredeweg
    Samuel O. Purvine
    Dehong Hu
    Thomas O. Metz
    Scott E. Baker
    BMC Genomics, 17
  • [34] Unravelling the molecular mechanism underlying drought stress response in chickpea via integrated multi-omics analysis
    Singh, Vikram
    Gupta, Khushboo
    Singh, Shubhangi
    Jain, Mukesh
    Garg, Rohini
    FRONTIERS IN PLANT SCIENCE, 2023, 14
  • [35] The multi-omics analysis in the hepatopancreas of Eriocheir sinensis provides novel insights into the response mechanism of heat stress
    Shen, Chenchen
    Feng, Guangpeng
    Zhao, Feng
    Huang, Xiaorong
    Li, Xincang
    COMPARATIVE BIOCHEMISTRY AND PHYSIOLOGY D-GENOMICS & PROTEOMICS, 2024, 50
  • [36] Multi-omics analysis reveals the epitranscriptomic and proteomic regulation network of tomato in low-temperature stress response
    Wang, Na
    Li, Yanting
    Guo, Tianli
    Jiang, Libo
    HORTICULTURAL PLANT JOURNAL, 2025, 11 (02) : 758 - 773
  • [37] Multi-omics analysis reveals the epitranscriptomic and proteomic regulation network of tomato in low-temperature stress response
    Na Wang
    Yanting Li
    Tianli Guo
    Libo Jiang
    Horticultural Plant Journal, 2025, 11 (02) : 758 - 773
  • [38] Multi-omics reveals specific host metabolism-microbiome associations in intracerebral hemorrhage
    Chen, Lei
    Wang, Sai
    Zhang, Yupeng
    Li, Ye
    Zhang, Xiangbin
    Ma, Junyi
    Zou, Xuelun
    Yao, TianXing
    Li, Si
    Chen, Junyou
    Zhou, Huifang
    Wu, Lianxu
    Zhou, Yanhong
    Zhang, Le
    FRONTIERS IN CELLULAR AND INFECTION MICROBIOLOGY, 2022, 12
  • [39] Daphnia stress response to environmental concentrations of chloramphenicol—multi-omics approach
    Grzesiuk, Malgorzata
    Grabska, Marta
    Malinowska, Agata
    Świderska, Bianka
    Grzesiuk, Elzbieta
    Garbicz, Damian
    Gorecki, Adrian
    Environmental Science and Pollution Research, 2024, 31 (49) : 58876 - 58888
  • [40] Response Mechanisms to Flooding Stress in Mulberry Revealed by Multi-Omics Analysis
    Hu, Jingtao
    Chen, Wenjing
    Duan, Yanyan
    Ru, Yingjing
    Cao, Wenqing
    Xiang, Pingwei
    Huang, Chengzhi
    Zhang, Li
    Chen, Jingsheng
    Gan, Liping
    PHYTON-INTERNATIONAL JOURNAL OF EXPERIMENTAL BOTANY, 2024, 93 (02) : 227 - 245