Precise electrochemical fabrication of sub-20 nm solid-state nanopores for single-molecule biosensing

被引:50
|
作者
Ayub, Mariam [1 ,2 ]
Ivanov, Aleksandar [1 ,2 ]
Hong, Jongin [1 ,2 ]
Kuhn, Phillip [1 ,2 ]
Instuli, Emanuele [1 ,2 ]
Edel, Joshua B. [1 ,2 ]
Albrecht, Tim [1 ]
机构
[1] Univ London Imperial Coll Sci Technol & Med, Dept Chem, London SW7 2AZ, England
[2] Univ London Imperial Coll Sci Technol & Med, Inst Biomed Engn, London SW7 2AZ, England
基金
英国工程与自然科学研究理事会;
关键词
DNA TRANSLOCATION; NUCLEIC-ACIDS; ION-TRANSPORT; MEMBRANES; RECTIFICATION;
D O I
10.1088/0953-8984/22/45/454128
中图分类号
O469 [凝聚态物理学];
学科分类号
070205 ;
摘要
It has recently been shown that solid-state nanometer-scale pores ('nanopores') can be used as highly sensitive single-molecule sensors. For example, electrophoretic translocation of DNA, RNA and proteins through such nanopores has enabled both detection and structural analysis of these complex biomolecules. Control over the nanopore size is critical as the pore must be comparable in size to the analyte molecule in question. The most widely used fabrication methods are based on focused electron or ion beams and thus require (scanning) transmission electron microscopy and focused ion beam (FIB) instrumentation. Even though very small pores have been made using these approaches, several issues remain. These include the requirement of being restricted to rather thin, mechanically less stable membranes, particularly for pore diameters in the single-digit nanometer range, lack of control of the surface properties at and inside the nanopore, and finally, the fabrication cost. In the proof-of-concept study, we report on a novel and simple route for fabricating metal nanopores with apparent diameters below 20 nm using electrodeposition and real-time ionic current feedback in solution. This fabrication approach inserts considerable flexibility into the kinds of platforms that can be used and the nanopore membrane material. Starting from much larger pores, which are straightforward to make using FIB or other semiconductor fabrication methods, we electrodeposit Pt at the nanopore interface while monitoring its ionic conductance at the same time in a bi-potentiostatic setup. Due to the deposition of Pt, the nanopore decreases in size, resulting in a decrease of the pore conductance. Once a desired pore conductance has been reached, the electrodeposition process is stopped by switching the potential of the membrane electrode and the fabrication process is complete. Furthermore, we demonstrate that these pores can be used for single-biomolecule analysis, such as that of lambda-DNA, which we use in a proof-of-concept study. Importantly, our approach is applicable to single nanopores as well as nanopore arrays, and can easily be extended to deposits of metal other than Pt.
引用
收藏
页数:8
相关论文
共 50 条
  • [31] Label-Free Detection and Translocation Dynamics Study of Single-Molecule Herceptin Using Solid-State Nanopores
    Hu, Rui
    Lu, Wenlong
    Wei, Guanghao
    Nan, Hexin
    Li, Juan
    Zhao, Qing
    ADVANCED MATERIALS TECHNOLOGIES, 2022, 7 (12):
  • [32] Automated Fabrication of 2-nm Solid-State Nanopores for Nucleic Acid Analysis
    Briggs, Kyle
    Kwok, Harold
    Tabard-Cossa, Vincent
    SMALL, 2014, 10 (10) : 2077 - 2086
  • [33] Single molecule sensing with solid-state nanopores: novel materials, methods, and applications
    Miles, Benjamin N.
    Ivanov, Aleksandar P.
    Wilson, Kerry A.
    Dogan, Fatma
    Japrung, Deanpen
    Edel, Joshua B.
    CHEMICAL SOCIETY REVIEWS, 2013, 42 (01) : 15 - 28
  • [34] SEM-induced shrinking of solid-state nanopores for single molecule detection
    Prabhu, Anmiv S.
    Freedman, Kevin J.
    Robertson, Joseph W. F.
    Nikolov, Zhorro
    Kasianowicz, John J.
    Kim, Min Jun
    NANOTECHNOLOGY, 2011, 22 (42)
  • [35] High-Resolution and Low-Noise Single-Molecule Sensing with Bio-Inspired Solid-State Nanopores
    Zhou, Wanqi
    Guo, Yufeng
    Guo, Wanlin
    Qiu, Hu
    JOURNAL OF PHYSICAL CHEMISTRY LETTERS, 2024, 15 (20): : 5556 - 5563
  • [36] Single-Molecule Identification of the Conformations of Human C-Reactive Protein and Its Aptamer Complex with Solid-State Nanopores
    Wu, Ji
    Liang, Liyuan
    Zhang, Mingkun
    Zhu, Rui
    Wang, Zhong
    Yin, Yajie
    Yin, Bohua
    Weng, Ting
    Fang, Shaoxi
    Xie, Wanyi
    Wang, Liang
    Wang, Deqiang
    ACS APPLIED MATERIALS & INTERFACES, 2022, 14 (10) : 12077 - 12088
  • [37] Single-Molecule Bonds Characterized by Solid-State Nanopore Force Spectroscopy
    Tabard-Cossa, Vincent
    Wiggin, Matthew
    Trivedi, Dhruti
    Jetha, Nahid N.
    Dwyer, Jason R.
    Marziali, Andre
    ACS NANO, 2009, 3 (10) : 3009 - 3014
  • [38] Fabrication and characterization of sub-3 nm gaps for single-cluster and single-molecule experiments
    Lambert, MF
    Goffman, MF
    Bourgoin, JP
    Hesto, P
    NANOTECHNOLOGY, 2003, 14 (07) : 772 - 777
  • [39] Aptamer-DNA Origami-Functionalized Solid-State Nanopores for Single-Molecule Sensing of G-Quadruplex Formation
    Pal, Sohini
    Naik, Akshay
    Rao, Anjana
    Chakraborty, Banani
    Varma, Manoj M.
    ACS APPLIED NANO MATERIALS, 2022, : 8804 - 8810
  • [40] Single-Molecule Protein Unfolding in Solid State Nanopores (vol 131, pg 9287, 2009)
    Talaga, David S.
    Li, Jiali
    JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 2013, 135 (35) : 13220 - 13220