Disorder transitions and conformational diversity cooperatively modulate biological function in proteins

被引:13
|
作者
Javier Zea, Diego [1 ]
Miguel Monzon, Alexander [1 ]
Gonzalez, Claudia [1 ]
Silvina Fornasari, Maria [1 ]
Tosatto, Silvio C. E. [2 ]
Parisi, Gustavo [1 ]
机构
[1] Natl Univ Quilmes, Dept Sci & Technol, Struct Bioinformat Grp, Bernal, Argentina
[2] Univ Padua, Dept Biomed Sci, Biocomp Up, I-35100 Padua, Italy
关键词
disorder; conformational diversity; protein function; transitions; STRUCTURAL DISORDER; INTRINSIC DISORDER; DYNAMICS; ALLOSTERY; DATABASE; ENSEMBLES; CATALYSIS;
D O I
10.1002/pro.2931
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Structural differences between conformers sustain protein biological function. Here, we studied in a large dataset of 745 intrinsically disordered proteins, how ordered-disordered transitions modulate structural differences between conformers as derived from crystallographic data. We found that almost 50% of the proteins studied show no transitions and have low conformational diversity while the rest show transitions and a higher conformational diversity. In this last subset, 60% of the proteins become more ordered after ligand binding, while 40% more disordered. As protein conformational diversity is inherently connected with protein function our analysis suggests differences in structure-function relationships related to order-disorder transitions.
引用
收藏
页码:1138 / 1146
页数:9
相关论文
共 50 条
  • [21] Asymmetric Conformational Transitions in AAA plus Biological Nanomachines Modulate Direction-Dependent Substrate Protein Unfolding Mechanisms
    Javidialesaadi, Abdolreza
    Stan, George
    JOURNAL OF PHYSICAL CHEMISTRY B, 2017, 121 (29): : 7108 - 7121
  • [22] BIOLOGICAL DIVERSITY OF COLLAGENOUS PROTEINS
    TANZER, ML
    TRENDS IN BIOCHEMICAL SCIENCES, 1978, 3 (01) : 15 - 17
  • [23] The tumor suppressors merlin and expanded function cooperatively to modulate receptor endocytosis and signaling
    Maitra, S
    Kulikauskas, RM
    Gavilan, H
    Fehon, RG
    CURRENT BIOLOGY, 2006, 16 (07) : 702 - 709
  • [24] Characterizing disorder to order transitions in proteins
    Stultz, Collin
    ABSTRACTS OF PAPERS OF THE AMERICAN CHEMICAL SOCIETY, 2016, 252
  • [25] Proteins modulate proton titration through redistribution of the conformational ensemble
    Whitten, ST
    Garcia-Moreno, B
    Hilser, VJ
    BIOPHYSICAL JOURNAL, 2002, 82 (01) : 300A - 301A
  • [26] MicroRNAs and their isomiRs function cooperatively to target common biological pathways
    Nicole Cloonan
    Shivangi Wani
    Qinying Xu
    Jian Gu
    Kristi Lea
    Sheila Heater
    Catalin Barbacioru
    Anita L Steptoe
    Hilary C Martin
    Ehsan Nourbakhsh
    Keerthana Krishnan
    Brooke Gardiner
    Xiaohui Wang
    Katia Nones
    Jason A Steen
    Nicholas A Matigian
    David L Wood
    Karin S Kassahn
    Nic Waddell
    Jill Shepherd
    Clarence Lee
    Jeff Ichikawa
    Kevin McKernan
    Kelli Bramlett
    Scott Kuersten
    Sean M Grimmond
    Genome Biology, 12
  • [27] CONFORMATIONAL ASPECTS OF PROTEINS MODULATE THE SITE SELECTIVITY OF NONENZYMIC GLYCATION
    NACHARAJU, P
    ACHARYA, AS
    FASEB JOURNAL, 1992, 6 (01): : A183 - A183
  • [28] MicroRNAs and their isomiRs function cooperatively to target common biological pathways
    Cloonan, Nicole
    Wani, Shivangi
    Xu, Qinying
    Gu, Jian
    Lea, Kristi
    Heater, Sheila
    Barbacioru, Catalin
    Steptoe, Anita L.
    Martin, Hilary C.
    Nourbakhsh, Ehsan
    Krishnan, Keerthana
    Gardiner, Brooke
    Wang, Xiaohui
    Nones, Katia
    Steen, Jason A.
    Matigian, Nicholas A.
    Wood, David L.
    Kassahn, Karin S.
    Waddell, Nic
    Shepherd, Jill
    Lee, Clarence
    Ichikawa, Jeff
    McKernan, Kevin
    Bramlett, Kelli
    Kuersten, Scott
    Grimmond, Sean M.
    GENOME BIOLOGY, 2011, 12 (12):
  • [29] Conformational stability of biological polyelectrolytes:: Evaluation of enthalpy and entropy changes of conformational transitions
    Benegas, JC
    Cesàro, A
    Rizzo, R
    Paoletti, S
    BIOPOLYMERS, 1998, 45 (03) : 203 - 216
  • [30] A STUDY OF CONFORMATIONAL TRANSITIONS IN PROTEINS BY PULSED NMR METHOD
    BLEARS, DJ
    DANYLUK, SS
    BIOCHIMICA ET BIOPHYSICA ACTA, 1967, 147 (02) : 404 - &