BRANCHING BROWNIAN MOTION AND SELECTION IN THE SPATIAL Λ-FLEMING-VIOT PROCESS

被引:7
|
作者
Etheridge, Alison [1 ]
Freeman, Nic [2 ]
Penington, Sarah [1 ]
Straulino, Daniel [1 ]
机构
[1] Univ Oxford, Dept Stat, 24-29 St Giles, Oxford, England
[2] Univ Sheffield, Sch Math & Stat, Hounsfield Rd, Sheffield, S Yorkshire, England
来源
ANNALS OF APPLIED PROBABILITY | 2017年 / 27卷 / 05期
基金
英国工程与自然科学研究理事会;
关键词
Spatial Lambda-Fleming-Viot process; branching; coalescing; natural selection; branching Brownian motion; population genetics; FIXATION PROBABILITY; ALLELE;
D O I
10.1214/16-AAP1245
中图分类号
O21 [概率论与数理统计]; C8 [统计学];
学科分类号
020208 ; 070103 ; 0714 ;
摘要
We ask the question "when will natural selection on a gene in a spatially structured population cause a detectable trace in the patterns of genetic variation observed in the contemporary population?" We focus on the situation in which "neighbourhood size", that is the effective local population density, is small. The genealogy relating individuals in a sample from the population is embedded in a spatial version of the ancestral selection graph and through applying a diffusive scaling to this object we show that whereas in dimensions at least three, selection is barely impeded by the spatial structure, in the most relevant dimension, d = 2, selection must be stronger (by a factor of log(1/mu) where mu is the neutral mutation rate) if we are to have a chance of detecting it. The case d = 1 was handled in Etheridge, Freeman and Straulino (The Brownian net and selection in the spatial Lambda-Fleming-Viot. Preprint). The mathematical interest is that although the system of branching and coalescing lineages that forms the ancestral selection graph converges to a branching Brownian motion, this reflects a delicate balance of a branching rate that grows to infinity and the instant annullation of almost all branches through coalescence caused by the strong local competition in the population.
引用
收藏
页码:2605 / 2645
页数:41
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