A novel statistical approach for the evaluation of comet assay data

被引:40
|
作者
Seitz, Nadja [1 ]
Boettcher, Melanie [1 ]
Keiter, Steffen [1 ]
Kosmehl, Thomas [1 ]
Manz, Werner [2 ]
Hollert, Henner [1 ,3 ]
Braunbeck, Thomas [1 ]
机构
[1] Heidelberg Univ, Dept Zool, Aquat Ecol & Toxicol Sect, D-69120 Heidelberg, Germany
[2] Fed Inst Hydrol, D-56068 Koblenz, Germany
[3] Rhein Westfal TH Aachen, Dept Ecosyst Anal, Inst Environm Res Biol 5, D-52074 Aachen, Germany
关键词
comet assay; Danube basin; evaluation; genotoxicity; sediment contact assay; zebrafish (Danio rerio);
D O I
10.1016/j.mrgentox.2007.12.004
中图分类号
Q81 [生物工程学(生物技术)]; Q93 [微生物学];
学科分类号
071005 ; 0836 ; 090102 ; 100705 ;
摘要
The present study forms part of a weight-of-evidence framework including genotoxicological studies in the upper Danube River basin, which aim at elucidating the reasons for the decline in fish catch. The major focus of this paper is the assessment of genotoxicity of sediments from the Danube River basin by use of the comet assay with RTL-W1 cells and with embryos of zebrafish (Danio rerio). A frequently discussed question in this type of approach is how to aggregate and compare the data obtained from genotoxicity testing. There is a need to develop mathematical method combining the information from dose-response curves and level of effectiveness (maximum genotoxic effect). For comparison and ranking of the genotoxic potential of samples from different locations along the Danube River, several methods based on EC50, Lowest Observed Effect Concentration (LOEC), and maximum induction factor were compared with respect to their validity. An evaluation system termed the "3-step, analysis" was developed to facilitate consideration of a maximum number of aspects of the raw data. The so-called "concentration-dependent induction factor" (CDI) introduces an index for a straightforward, precise and realistic assessment of the genotoxic potential of any kind of field sample or genotoxic agent. (C) 2008 Published by Elsevier B.V.
引用
收藏
页码:38 / 45
页数:8
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