The complete chloroplast genome sequence ofMalus toringoides(Rosaceae)

被引:8
|
作者
Li, Yanan [1 ,2 ]
Liu, Yanlei [2 ,3 ]
Wu, Ping [2 ,3 ]
Zhou, Sheng [1 ]
Wang, Ling [1 ]
Zhou, Shiliang [2 ]
机构
[1] Northeast Forestry Univ, Coll Landscape Architecture, Harbin, Peoples R China
[2] Chinese Acad Sci, Inst Bot, State Key Lab Systemat & Evolutionary Bot, Beijing, Peoples R China
[3] Univ Chinese Acad Sci, Coll Life Sci, Beijing, Peoples R China
来源
MITOCHONDRIAL DNA PART B-RESOURCES | 2020年 / 5卷 / 03期
关键词
Malus toringoides; Amygdaloideae; Rosaceae; complete chloroplast genome; phylogenetic; ALGORITHM;
D O I
10.1080/23802359.2020.1780977
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
Malus toringoidesbelongs to the subfamily Amygdaloideae of Rosaceae, which is an endemic species in China. It has significant ornamental, economic, and ecological value. Herein, we assembled the complete chloroplast genome ofMalus toringoidesusing the next-generation sequencing technology. The total length of the complete chloroplast genome was 160,093 base pair (bp), consisting of one large single-copy (LSC) region with a sequence length of 88,177 bp, one small single-copy (SSC) region which sequence length is 19,194 bp, and a pair of inverted repeat regions (IRs, 26361 bp). Besides, the complete chloroplast genome contained 128 genes, namely 83 protein-coding genes (PCGs), 37 tRNA genes (tRNA), and 8 rRNAgenes (rRNA), the GC content was 36.6%. The phylogenetic relationship among species in genusMalusis closely related, especially the phylogenetic relationship amongMalus angustifolia, Malus prattii, Malus micromalus, Malus prunifolia, Malus baccata, Malus hupehensisandMalus toringoides. Furthermore, phylogenetic relationship ofMalus toringoidesinMaluswas closely related toMalus hupehensis. Our study affords important genetic information for further researches on the related species.
引用
收藏
页码:2790 / 2792
页数:3
相关论文
共 50 条
  • [11] The complete chloroplast genome sequence of Fragaria orientalis (Rosales: Rosaceae)
    Han, Yan
    Wu, Hai Bo
    Liu, Yuan
    MITOCHONDRIAL DNA PART B-RESOURCES, 2018, 3 (01): : 127 - 128
  • [12] The complete chloroplast genome sequence of Rosa 'Limoncello' (Rosales: Rosaceae)
    Wang, Jing
    Xie, Qiu-lan
    Feng, En-you
    Liu, Xiao-fei
    MITOCHONDRIAL DNA PART B-RESOURCES, 2023, 8 (12): : 1386 - 1390
  • [13] Characterization of the complete chloroplast genome sequence of Malus kansuensis (Rosaceae)
    Li, Lingli
    Ye, Yang
    Zhao, Mengran
    Xin, Haodong
    MITOCHONDRIAL DNA PART B-RESOURCES, 2021, 6 (01): : 108 - 109
  • [14] The complete chloroplast genome sequence of Rubus leucanthus Hance (Rosaceae)
    Guo, Wei
    Chen, Yanzhao
    Deng, Lei
    Wu, Wei
    MITOCHONDRIAL DNA PART B-RESOURCES, 2019, 4 (01): : 376 - 377
  • [15] The complete chloroplast genome sequence of Spiraeaxvanhouttei (Briot) Zabel (Rosaceae)
    Chen, Min-min
    Wang, Rui-hong
    Sha, Hong-kun
    Liu, Ming-zhi
    Tong, Jian-quan
    He, Qiu-Ling
    MITOCHONDRIAL DNA PART B-RESOURCES, 2022, 7 (03): : 505 - 506
  • [16] Characterization of the complete chloroplast genome ofMalus spectabilis'Guanghui'
    Jiao, Qiqing
    Tao, Jihan
    Wang, Chuanzeng
    Yin, Yanlei
    Feng, Lijuan
    MITOCHONDRIAL DNA PART B-RESOURCES, 2020, 5 (03): : 2555 - 2556
  • [17] The complete chloroplast genome sequence of Rubus peltatus Maxim. (Rosaceae)
    Qiao, Fei
    Guo, Wei
    Dai, Wenkui
    Huang, Weicheng
    Wu, Ling
    MITOCHONDRIAL DNA PART B-RESOURCES, 2022, 7 (06): : 1056 - 1057
  • [18] The complete chloroplast genome sequence of Korean raspberry Rubus crataegifolius (Rosaceae)
    Yang, Ji Young
    Pak, Jae-Hong
    Kim, Seung-Chul
    MITOCHONDRIAL DNA PART B-RESOURCES, 2017, 2 (02): : 793 - 794
  • [19] Characterization of the complete chloroplast genome sequence of Rubus rufus Focke (Rosaceae)
    Huang, Weicheng
    Qiao, Fei
    Guo, Wei
    Wu, Wei
    MITOCHONDRIAL DNA PART B-RESOURCES, 2021, 6 (11): : 3093 - 3094
  • [20] The complete chloroplast genome sequence of Prunus glandulosa Thunb. (Rosaceae)
    Yi, Meihong
    Yang, Lixue
    Zhou, Shiliang
    MITOCHONDRIAL DNA PART B-RESOURCES, 2021, 6 (11): : 3107 - 3108