Somatic mutations in histiocytic sarcoma identified by next generation sequencing

被引:46
|
作者
Liu, Qingqing [1 ,2 ,3 ]
Tomaszewicz, Keith [1 ,2 ]
Hutchinson, Lloyd [1 ,2 ]
Hornick, Jason L. [4 ]
Woda, Bruce [1 ,2 ]
Yu, Hongbo [1 ,2 ,5 ]
机构
[1] UMass Mem Med Ctr, Worcester, MA 01605 USA
[2] Univ Massachusetts, Sch Med, Worcester, MA 01655 USA
[3] Univ Texas MD Anderson Canc Ctr, Dept Pathol, 1515 Holcombe Blvd, Houston, TX 77030 USA
[4] Brigham & Womens Hosp, Dept Pathol, 75 Francis St, Boston, MA 02115 USA
[5] VA Boston Healthcare Syst, Pathol & Lab Med Serv, 1400 VFW Pkwy, West Roxbury, MA 02132 USA
关键词
Histiocytic sarcoma; Next generation sequencing; Somatic mutations; BRAF proto-oncogene; BRAF MUTATIONS; SIGNALING PATHWAY; LUNG-CANCER; CELL; POLYMORPHISMS; CHEMOTHERAPY; NEOPLASMS; CARCINOMA; MELANOMA; LEUKEMIA;
D O I
10.1007/s00428-016-1965-2
中图分类号
R36 [病理学];
学科分类号
100104 ;
摘要
Histiocytic sarcoma is a rare malignant neoplasm of presumed hematopoietic origin showing morphologic and immunophenotypic evidence of histiocytic differentiation. Somatic mutation importance in the pathogenesis or disease progression of histiocytic sarcoma was largely unknown. To identify somatic mutations in histiocytic sarcoma, we studied 5 histiocytic sarcomas [3 female and 2 male patients; mean age 54.8 (20-72), anatomic sites include lymph node, uterus, and pleura] and matched normal tissues from each patient as germ line controls. Somatic mutations in 50 "Hotspot" oncogenes and tumor suppressor genes were examined using next generation sequencing. Three (out of five) histiocytic sarcoma cases carried somatic mutations in BRAF. Among them, G464V [variant frequency (VF) of 43.6 %] and G466R (VF of 29.6 %) located at the P loop potentially interfere with the hydrophobic interaction between P and activating loops and ultimately activation of BRAF. Also detected was BRAF somatic mutation N581S (VF of 7.4 %), which was located at the catalytic loop of BRAF kinase domain: its role in modifying kinase activity was unclear. A similar mutational analysis was also performed on nine acute monocytic/monoblastic leukemia cases, which did not identify any BRAF somatic mutations. Our study detected several BRAF mutations in histiocytic sarcomas, which may be important in understanding the tumorigenesis of this rare neoplasm and providing mechanisms for potential therapeutical opportunities.
引用
收藏
页码:233 / 241
页数:9
相关论文
共 50 条
  • [11] Clinical Next-Generation Sequencing for the Identification of Somatic Mutations in Cancer
    Al-Kateb, H.
    Cottrell, C. E.
    Duncavage, E. J.
    Nguyen, T. T.
    Lockwood, C.
    Spenser, D.
    Bredemeyer, A.
    Head, R. D.
    Nagarajan, R.
    Pfeifer, J.
    Seibert, K.
    Govindan, R.
    Kulkarni, S.
    JOURNAL OF MOLECULAR DIAGNOSTICS, 2012, 14 (06): : 710 - 710
  • [12] Targeted next generation sequencing for somatic mutations in human cancer.
    Peterson, Jason D.
    de Abreu, Francine
    Gallagher, Torrey L.
    Burchard, Paul R.
    Amos, Christopher I.
    Wells, Wendy A.
    Pipas, J. Marc
    Ernstoff, Marc S.
    Fadul, Camilo E.
    Rigas, James R.
    Tsongalis, Gregory J.
    MOLECULAR CANCER THERAPEUTICS, 2013, 12 (11)
  • [13] An Intuitive Workflow to Retrieve Somatic Mutations in Next Generation Sequencing Studies
    Glez-Pena, Daniel
    Reboiro-Jato, Miguel
    Fdez-Riverola, Florentino
    Pisano, David G.
    Gomez-Lopez, Gonzalo
    5TH INTERNATIONAL CONFERENCE ON PRACTICAL APPLICATIONS OF COMPUTATIONAL BIOLOGY & BIOINFORMATICS (PACBB 2011), 2011, 93 : 83 - +
  • [14] Next generation sequencing in synovial sarcoma reveals novel gene mutations
    Vlenterie, Myrella
    Hillebrandt-Roeffen, Melissa H. S.
    Flucke, Uta E.
    Groenen, Patricia J. T. A.
    Tops, Bastiaan B. J.
    Kamping, Eveline J.
    Pfundt, Rolph
    de Bruijn, Diederik R. H.
    van Kessel, Ad H. M. Geurts
    van Krieken, Han J. H. J. M.
    van der Graaf, Winette T. A.
    Versleijen-Jonkers, Yvonne M. H.
    ONCOTARGET, 2015, 6 (33) : 34680 - 34690
  • [15] Next generation sequencing reveals targetable mutations in multiple sarcoma histologies
    Dorand, Rodney Dixon
    Robinson, Michael
    King, Lauren
    Schremp, Emma A.
    Miranda, Adam Xavier
    Colazo, Juan M.
    Park, Ben Ho
    Luo, Leo Y.
    Shu, Xiao-Ou
    Pal, Tuya
    Friedman, Debra L.
    Davis, Elizabeth J.
    JOURNAL OF CLINICAL ONCOLOGY, 2023, 41 (16)
  • [16] The primary pulmonary NUT carcinomas and some uncommon somatic mutations identified by next-generation sequencing: a case report
    Liu, Ying
    Li, Yan-Ying
    Ke, Xue-Xuan
    Lu, You
    AME CASE REPORTS, 2020, 4
  • [17] Exome sequencing covers >98% of mutations identified on targeted next generation sequencing panels
    LaDuca, Holly
    Farwell, Kelly D.
    Huy Vuong
    Lu, Hsiao-Mei
    Mu, Wenbo
    Shahmirzadi, Layla
    Tang, Sha
    Chen, Jefferey
    Bhide, Shruti
    Chao, Elizabeth C.
    PLOS ONE, 2017, 12 (02):
  • [18] Comparing exome with wholegenome next-generation sequencing in detecting somatic mutations
    Yue, Yong Gang
    Ting, Jason
    Ma, Xiwen
    Barber, Thomas D.
    CANCER RESEARCH, 2012, 72
  • [19] Profiling of Somatic Mutations in Phaeochromocytoma and Paraganglioma by Targeted Next Generation Sequencing Analysis
    Luchetti, Andrea
    Walsh, Diana
    Rodger, Fay
    Clark, Graeme
    Martin, Tom
    Irving, Richard
    Sanna, Mario
    Yao, Masahiro
    Robledo, Mercedes
    Neumann, Hartmut P. H.
    Woodward, Emma R.
    Latif, Farida
    Abbs, Stephen
    Martin, Howard
    Maher, Eamonn R.
    INTERNATIONAL JOURNAL OF ENDOCRINOLOGY, 2015, 2015
  • [20] Next generation whole exome sequencing for recurrent somatic mutations on chromosome 7
    Hosono, N.
    Makishima, H.
    Jerez, A.
    Przychodzen, B.
    Gomez-Segui, I.
    Sekeres, M.
    Miyano, S.
    Shiraishi, Y.
    Ogawa, S.
    Yoshida, K.
    Maciejewski, J. P.
    LEUKEMIA RESEARCH, 2013, 37 : S23 - S23