Rapid identification of dinoflagellates using protein profiling with matrix-assisted laser desorption/ionization mass spectrometry

被引:14
|
作者
Lee, Fred Wang-Fat [1 ]
Ho, Kin Chung [2 ]
Lo, Samuel Chun-Lap [1 ,3 ]
机构
[1] Hong Kong Polytech Univ, Dept Appl Biol & Chem Technol, Hong Kong, Hong Kong, Peoples R China
[2] Open Univ Hong Kong, Fac Sci & Technol, Hong Kong, Hong Kong, Peoples R China
[3] State Key Lab Tradit Chinese Med & Mol Pharmacol, Shenzhen, Peoples R China
关键词
dinoflagellates; harmful algal blooms (HABs); identification; MALDI; protein profiling;
D O I
10.1016/j.hal.2007.12.001
中图分类号
Q17 [水生生物学];
学科分类号
071004 ;
摘要
The occurrence of harmful algal blooms (HABs) or red tides is an important and expanding threat to human health, fishery resources, and the tourism industries. Toxic species post an additional treat of intoxication when consumed either in seafood or directly swallowed. Rapid and accurate identification of the HAB species is critical for minimizing or controlling the damage. We report the use of protein/peptide mass fingerprint profiles obtained with matrix-assisted laser desorption ionization time-of-flight (MALDI-TOF) mass spectrometry (MS) for the identification of dinoflagellates, common causative agents of HABs. The method is simple, fast and reproducible. The peptide mass fingerprint spectral patterns are unique for different dinoflagellate species and are easily distinguishable by visual inspection. In addition to the whole mass spectra, several specific biomarkers were identified from the mass spectra of different species. These biomarker ions and the mass spectral patterns form an unambiguous basis for species discrimination. (C) 2007 Elsevier B.V. All rights reserved.
引用
收藏
页码:551 / 559
页数:9
相关论文
共 50 条
  • [41] Analysis of protein sequences and protein complexes by matrix-assisted laser desorption/ionization mass spectrometry
    Belghazi, M
    Bathany, K
    Hountondji, C
    Grandier-Vazeille, X
    Manon, S
    Schmitter, JM
    PROTEOMICS, 2001, 1 (08) : 946 - 954
  • [42] Determination of protein-protein interactions by matrix-assisted laser desorption/ionization mass spectrometry
    Farmer, TB
    Caprioli, RM
    JOURNAL OF MASS SPECTROMETRY, 1998, 33 (08): : 697 - 704
  • [43] Rapid identification of clinical mycobacterial isolates by protein profiling using matrix assisted laser desorption ionization-time of flight mass spectrometry
    Panda, A.
    Kurapati, S.
    Samantaray, J. C.
    Myneedu, V. P.
    Verma, A.
    Srinivasan, A.
    Ahmad, H.
    Behera, D.
    Singh, U. B.
    INDIAN JOURNAL OF MEDICAL MICROBIOLOGY, 2013, 31 (02) : 117 - 122
  • [44] Rapid Identification of Intact Staphylococcal Bacteriophages Using Matrix-Assisted Laser Desorption Ionization-Time-of-Flight Mass Spectrometry
    Stverakova, Dana
    Sedo, Ondrej
    Benesik, Martin
    Zdrahal, Zbynek
    Doskar, Jiri
    Pantucek, Roman
    VIRUSES-BASEL, 2018, 10 (04):
  • [45] Direct analysis of alkaloid profiling in plant tissue by using matrix-assisted laser desorption/ionization mass spectrometry
    Wu, Wei
    Liang, Zhitao
    Zha, Zhongzhen
    Cai, Zongwei
    JOURNAL OF MASS SPECTROMETRY, 2007, 42 (01): : 58 - 69
  • [46] Analysis of zein by matrix-assisted laser desorption/ionization mass spectrometry
    Wang, JF
    Geil, PH
    Kolling, DRJ
    Padua, GW
    JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY, 2003, 51 (20) : 5849 - 5854
  • [47] Matrix-assisted laser desorption/ionization mass spectrometry in milk science
    Catinella, S
    Traldi, P
    Pinelli, C
    Dallaturca, E
    Marsilio, R
    RAPID COMMUNICATIONS IN MASS SPECTROMETRY, 1996, 10 (13) : 1629 - 1637
  • [48] Depurination of DNA and matrix-assisted laser desorption/ionization mass spectrometry
    Gut, IG
    INTERNATIONAL JOURNAL OF MASS SPECTROMETRY, 1997, 169 : 313 - 322
  • [49] Matrix-assisted laser desorption ionization mass-spectrometry of proteins
    Beavis, RC
    Chait, BT
    HIGH RESOLUTION SEPARATION AND ANALYSIS OF BIOLOGICAL MACROMOLECULES, PT A, 1996, 270 : 519 - 551
  • [50] Matrix-assisted laser desorption ionization mass spectrometry for biomolecule analysis
    Li, L
    ABSTRACTS OF PAPERS OF THE AMERICAN CHEMICAL SOCIETY, 1996, 212 : 200 - PHYS