Water interaction with α,α-trehalose:: molecular dynamics simulation

被引:59
|
作者
Bonanno, G
Noto, R
Fornili, SL
机构
[1] INFM, I-90123 Palermo, Italy
[2] Dept Phys & Astron Sci, I-90123 Palermo, Italy
[3] Inst Interdisciplinary Applicat Phys, CNR, I-90123 Palermo, Italy
关键词
D O I
10.1039/a804257h
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070304 ; 081704 ;
摘要
This paper reports on simulations of a rather large water-trehalose system, based on the AMBER compatible GLYCAM force-field (R. J. Woods, R. A. Dwek, C. J. Edge and B. Fraser-Reid, J. Phys. Chem., 1995, 99, 3832), whose applicability to trehalose has been carefully examined using ab initio quantum mechanical calculations to optimize the molecular geometry and to evaluate the net atomic charges. Statistical analyses of the simulation trajectories show that the structure and dynamics of the solvent are remarkably affected by the presence of trehalose. In particular, ca. 36 water molecules are found to reside in the first hydration shell, 19 of which are hydrogen bonded to trehalose. The water mobility within the first hydration shell is ca. 25% smaller than that of pure water.
引用
收藏
页码:2755 / 2762
页数:8
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