The complete chloroplast genome sequence of Mangifera sylvatica Roxb. (Anacardiaceae) and its phylogenetic analysis

被引:2
|
作者
Zhang, Yu [1 ]
Ou, Ke-Wei [1 ]
Huang, Guo-Di [1 ]
Lu, Ye-Fei [1 ]
Yang, Guo-Qian [2 ]
Pang, Xin-Hua [1 ]
机构
[1] Guangxi Acad Agr Sci, Guangxi Subtrop Crops Res Inst, Nanning 530001, Peoples R China
[2] Shanghai Jiao Tong Univ, Sch Agr & Biol, Shanghai, Peoples R China
来源
MITOCHONDRIAL DNA PART B-RESOURCES | 2020年 / 5卷 / 01期
关键词
Chromoplast; wild mango; Mangifera sylvatica; phylogenetic relationship;
D O I
10.1080/23802359.2020.1715286
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
In this study, we firstly reported the complete chloroplast (cp) genome sequences of the Mangifera sylvatica from Nanning, Guangxi province, China. The complete wild mango cp genome size is 158063 bp with a typical small single-copy region (SSC, 18340 bp), a large single-copy region (LSC, 87008 bp) and a pair of inverted repeats (IRs, 26379 bp and 26379 bp respectively). Out of 112 unique annotated genes in mango cp genome, 78 found to be protein coding, 30 to be tRNA and 4 rRNA genes. Besides, we found 51 microsatellite sequences (SSRs) in the cp genome. Sequence alignment and ML analysis of 29 full plastome data revealed M. sylvatica shares the closest relationship with cultivated mango (M. indica) and form a sister group with Rhus chinensis within Anacardiaceae.
引用
收藏
页码:738 / 739
页数:2
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