Transcriptome analysis of the acoelomate human parasite Schistosoma mansoni

被引:386
|
作者
Verjovski-Almeida, S [1 ]
DeMarco, R
Martins, EAL
Guimaraes, PEM
Ojopi, EPB
Paquola, ACM
Piazza, JP
Nishiyama, MY
Kitajima, JP
Adamson, RE
Ashton, PD
Bonaldo, MF
Coulson, PS
Dillon, GP
Farias, LP
Gregorio, SP
Ho, PL
Leite, RA
Malaquias, LCC
Marques, RCP
Miyasato, PA
Nascimento, ALTO
Ohlweiler, FP
Reis, EM
Ribeiro, MA
Sá, RG
Stukart, GC
Soares, MB
Gargioni, C
Kawano, T
Rodrigues, V
Madeira, AMBN
Wilson, RA
Menck, CFM
Setubal, JC
Leite, LCC
Dias-Neto, E
机构
[1] Univ Sao Paulo, Inst Quim, Dept Bioquim, BR-05508900 Sao Paulo, Brazil
[2] Inst Butantan, Ctr Biotecnol, BR-05503900 Sao Paulo, Brazil
[3] Univ Sao Paulo, HCFM, Inst Psiquiatria, Lab Neurosci LIM27, BR-05403010 Sao Paulo, Brazil
[4] Univ Sao Paulo, Inst Quim, Dept Bioquim, Lab Bioinformat, BR-05508900 Sao Paulo, Brazil
[5] Univ Estadual Campinas, Inst Computacao, BR-13084971 Campinas, SP, Brazil
[6] Univ York, Dept Biol, York YO10 5YW, N Yorkshire, England
[7] Univ Iowa, Dept Pediat, Iowa City, IA 52242 USA
[8] Univ Sao Paulo, Inst Ciencias Biomed, Dept Microbiol, BR-05508900 Sao Paulo, Brazil
[9] Univ Vale Rio Doce, BR-35030390 Governador Valadares, MG, Brazil
[10] Inst Butantan, Parasitol Lab, BR-05503900 Sao Paulo, Brazil
[11] Univ Sao Paulo, Fac Med Vet & Zootecnia, BR-05508900 Sao Paulo, Brazil
[12] Univ Sao Paulo, Fac Med Ribeirao Preto, Dept Bioquim & Imunol, BR-14049900 Ribeirao Preto, SP, Brazil
[13] Univ Iowa, Dept Biochem, Iowa City, IA 52242 USA
[14] Univ Iowa, Dept Orthopaed, Iowa City, IA 52242 USA
[15] Univ Iowa, Dept Physiol, Iowa City, IA 52242 USA
[16] Univ Iowa, Dept Biophys, Iowa City, IA 52242 USA
[17] Inst Adolfo Lutz Registro, Dept Parasitol, BR-01246902 Sao Paulo, Brazil
关键词
D O I
10.1038/ng1237
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
Schistosoma mansoni is the primary causative agent of schistosomiasis, which affects 200 million individuals in 74 countries. We generated 163,000 expressed-sequence tags ( ESTs) from normalized cDNA libraries from six selected developmental stages of the parasite, resulting in 31,000 assembled sequences and 92% sampling of an estimated 14,000 gene complement. By analyzing automated Gene Ontology assignments, we provide a detailed view of important S. mansoni biological systems, including characterization of metazoa-specific and eukarya-conserved genes. Phylogenetic analysis suggests an early divergence from other metazoa. The data set provides insights into the molecular mechanisms of tissue organization, development, signaling, sexual dimorphism, host interactions and immune evasion and identifies novel proteins to be investigated as vaccine candidates and potential drug targets.
引用
收藏
页码:148 / 157
页数:10
相关论文
共 50 条
  • [41] A Systematically Improved High Quality Genome and Transcriptome of the Human Blood Fluke Schistosoma mansoni
    Protasio, Anna V.
    Tsai, Isheng J.
    Babbage, Anne
    Nichol, Sarah
    Hunt, Martin
    Aslett, Martin A.
    De Silva, Nishadi
    Velarde, Giles S.
    Anderson, Tim J. C.
    Clark, Richard C.
    Davidson, Claire
    Dillon, Gary P.
    Holroyd, Nancy E.
    LoVerde, Philip T.
    Lloyd, Christine
    McQuillan, Jacquelline
    Oliveira, Guilherme
    Otto, Thomas D.
    Parker-Manuel, Sophia J.
    Quail, Michael A.
    Wilson, R. Alan
    Zerlotini, Adhemar
    Dunne, David W.
    Berriman, Matthew
    PLOS NEGLECTED TROPICAL DISEASES, 2012, 6 (01)
  • [42] Transcriptome analysis of Schistosoma mansoni larval development using serial analysis of gene expression (SAGE)
    Taft, A. S.
    Vermeire, J. J.
    Bernier, J.
    Birkeland, S. R.
    Cipriano, M. J.
    Papa, A. R.
    McArthur, A. G.
    Yoshino, T. P.
    PARASITOLOGY, 2009, 136 (05) : 469 - 485
  • [43] Eukaryotic Protein Kinases (ePKs) of the Helminth Parasite Schistosoma mansoni
    Andrade, Luiza F.
    Nahum, Laila A.
    Avelar, Livia G. A.
    Silva, Larissa L.
    Zerlotini, Adhemar
    Ruiz, Jeronimo C.
    Oliveira, Guilherme
    BMC GENOMICS, 2011, 12
  • [44] Activation of invariant NKT cells by the helminth parasite Schistosoma mansoni
    Mallevaey, T
    Zanetta, JP
    Faveeuw, C
    Fontaine, J
    Maes, E
    Platt, F
    Capron, M
    Leite-de-Moraes, M
    Trottein, F
    JOURNAL OF IMMUNOLOGY, 2006, 176 (04): : 2476 - 2485
  • [45] The class I histone deacetylases of the platyhelminth parasite Schistosoma mansoni
    Oger, Frederik
    Dubois, Florence
    Caby, Stephanie
    Noel, Christophe
    Cornette, Jocelyne
    Bertin, Benjamin
    Capron, Monique
    Pierce, Raymond J.
    BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS, 2008, 377 (04) : 1079 - 1084
  • [46] Whole genome resequencing of the human parasite Schistosoma mansoni reveals population history and effects of selection
    Thomas Crellen
    Fiona Allan
    Sophia David
    Caroline Durrant
    Thomas Huckvale
    Nancy Holroyd
    Aidan M. Emery
    David Rollinson
    David M. Aanensen
    Matthew Berriman
    Joanne P. Webster
    James A. Cotton
    Scientific Reports, 6
  • [47] Diversification of the insulin receptor family in the helminth parasite Schistosoma mansoni
    Khayath, Naji
    Vicogne, Jerome
    Ahier, Arnaud
    BenYounes, Amena
    Konrad, Christian
    Trolet, Jacques
    Viscogliosi, Eric
    Brehm, Klaus
    Dissous, Colette
    FEBS JOURNAL, 2007, 274 (03) : 659 - 676
  • [48] Schistosoma mansoni TOR is a tetraspanning orphan receptor on the parasite surface
    Lochmatter, C.
    Schifferli, J. A.
    Martin, P. J.
    PARASITOLOGY, 2009, 136 (05) : 487 - 498
  • [49] IMMUNOSUPPRESSION IN THE DEFINITIVE AND INTERMEDIATE HOSTS OF THE HUMAN PARASITE SCHISTOSOMA-MANSONI BY RELEASE OF IMMUNOACTIVE NEUROPEPTIDES
    DUVAUXMIRET, O
    STEFANO, GB
    SMITH, EM
    DISSOUS, C
    CAPRON, A
    PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1992, 89 (02) : 778 - 781
  • [50] Genome-wide identification of novel microRNAs and their target genes in the human parasite Schistosoma mansoni
    Gomes, Matheus de Souza
    Muniyappa, Mohan Kumar
    Carvalho, Savio Goncalves
    Guerra-Sa, Renata
    Spillane, Charles
    GENOMICS, 2011, 98 (02) : 96 - 111