Neural Network Molecular Dynamics at Scale

被引:2
|
作者
Rajak, Pankaj [1 ]
Liu, Kuang [2 ]
Krishnamoorthy, Aravind [2 ]
Kalia, Rajiv K. [2 ]
Nakano, Aiichiro [2 ]
Nomura, Ken-ichi [2 ]
Tiwari, Subodh C. [2 ]
Vashishta, Priya [2 ]
机构
[1] Argonne Natl Lab, Argonne Leadership Comp Facil, Lemont, IL 60439 USA
[2] Univ Southern Calif, Collaboratory Adv Comp & Simulat, Los Angeles, CA 90007 USA
关键词
neural nebvork; molecular dynamics; parallel computing; phase change materials; fist sharp diffraction peak; off-stoichiometry; PHASE-CHANGE MATERIALS; POTENTIALS;
D O I
10.1109/IPDPSW50202.2020.00167
中图分类号
TP3 [计算技术、计算机技术];
学科分类号
0812 ;
摘要
Neural network molecular dynamics (NNMD) simulations could revolutionize atomistic modeling of materials with quantum-mechanical accuracy at a fraction of computational cost. However, popular NNMD frameworks are generally implemented for a single computing node, and conventional energy-based NN models still suffer from large time-to-solution (T2S), prohibiting the application of NNMD to challenging materials simulations encompassing large spatiotemporal scales. Consequently, no leadership-scale NNMD simulation has thus far been reported. Here, we present a scalable parallel NNMD software (RXMD-NN) based on our scalable reactive molecular dynamics simulation engine named RXMD. RXMD-NN has achieved high scalability up to 786,432 IBM BlueGene/Q cores involving 1.7 billion atoms. Furthermore, we have achieved 4.6-fold reduction of T2S by using a novel network that directly predicts atomic forces from feature vectors. Reduced T2S has for the first time allowed the study of large-scale off-stoichiometry effect in a widely used phase change material, Ge 2 Se 2 Te 5 , thereby resolving its "firstsharp diffraction peak mystery".
引用
收藏
页码:991 / 994
页数:4
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