GATA family of transcription factors of vertebrates: phylogenetics and chromosomal synteny

被引:15
|
作者
He, Chunjiang
Cheng, Hanhua [1 ]
Zhou, Rongjia
机构
[1] Wuhan Univ, Coll Life Sci, Dept Genet, Wuhan 430072, Peoples R China
基金
中国国家自然科学基金;
关键词
Phylogeny; transcription factor; vertebrates; zinc finger domain;
D O I
10.1007/s12038-007-0136-7
中图分类号
Q [生物科学];
学科分类号
07 ; 0710 ; 09 ;
摘要
GATA genes are an evolutionarily conserved family, which encode a group of important transcription factors involved in the regulation of diverse processes including the development of the heart, haematopoietic system and sex gonads. However, the evolutionary history of the GATA family has not been completely understood. We constructed a complete phylogenetic tree with functional domain information of the GATA genes of both vertebrates and several invertebrates, and mapped the GATA genes onto relevant chromosomes. Conserved synteny was observed around the GATA loci on the chromosomes. GATAs have a tendency to segregate onto different chromosomes during evolution. The phylogenetic tree is consistent with the relevant functions of GATA members. Analysis of the zinc finger domain showed that the domain tends to be duplicated during evolution from invertebrates to vertebrates. We propose that the balance between duplications of zinc finger domains and GATA members should be maintained to exert their physiological roles in each evolutionary stage. Therefore, evolutionary pressure on the GATAs must exist to maintain the balance during evolution from invertebrates to vertebrates. These results reveal the evolutionary characteristics of the GATA family and contribute to a better understanding of the relationship between evolution and biological functions of the gene family, which will help to uncover the GATAs' biological roles, evolution and their relationship with associated diseases.
引用
收藏
页码:1273 / 1280
页数:8
相关论文
共 50 条
  • [21] GATA Transcription Factors in Hematologic Disease
    Alan B. Cantor
    International Journal of Hematology, 2005, 81 : 378 - 384
  • [22] GATA transcription factors in hematologic disease
    Cantor, AB
    INTERNATIONAL JOURNAL OF HEMATOLOGY, 2005, 81 (05) : 378 - 384
  • [23] Flow cytometry of GATA transcription factors
    Miura, T
    Yokoyama, H
    Minegishi, N
    Sasaki, T
    Kaku, M
    Harigae, H
    CYTOMETRY PART B-CLINICAL CYTOMETRY, 2003, 56B (01) : 1 - 7
  • [24] Identification, chromosomal mapping and conserved synteny of porcine Argonaute family of genes
    Zhou, Xiang
    Guo, Heng
    Chen, Ke
    Cheng, Hanhua
    Zhou, Rongjia
    GENETICA, 2010, 138 (07) : 805 - 812
  • [25] GATA transcription factors and hematological diseases
    Harigae, Hideo
    TOHOKU JOURNAL OF EXPERIMENTAL MEDICINE, 2006, 210 (01): : 1 - 9
  • [26] Interaction between GATA and the C/EBP family of transcription factors is critical in GATA-mediated suppression of adipocyte differentiation
    Tong, Q
    Tsai, J
    Tan, G
    Dalgin, G
    Hotamisligil, GS
    MOLECULAR AND CELLULAR BIOLOGY, 2005, 25 (02) : 706 - 715
  • [27] Expression of the GATA family of transcription factors in human breast cancer cell lines.
    Sadler, AJ
    Shaw, LE
    Darbre, PD
    BREAST CANCER RESEARCH AND TREATMENT, 2004, 88 : S180 - S180
  • [28] GATA family transcription factors regulate the lactase gene promoter during enterocyte differentiation
    Fang, RX
    Olds, LC
    Santiago, NA
    Lin, CK
    Sibley, E
    GASTROENTEROLOGY, 1999, 116 (04) : A549 - A549
  • [29] Expression of GATA family of transcription factors in T-cells, monocytes and bronchial biopsies
    Caramori, G
    Lim, S
    Ito, K
    Tomita, K
    Oates, T
    Jazrawi, E
    Chung, KF
    Barnes, PJ
    Adcock, IM
    EUROPEAN RESPIRATORY JOURNAL, 2001, 18 (03) : 466 - 473
  • [30] GATA transcription factors in the developing and adult heart
    Pikkarainen, S
    Tokola, H
    Kerkelä, R
    Ruskoaho, H
    CARDIOVASCULAR RESEARCH, 2004, 63 (02) : 196 - 207