Big Data Trends in Bioinformatics

被引:0
|
作者
da Silva, Dennis Savio M. [1 ,2 ]
da Silva, Waldeyr M. C. [3 ]
RuiZhe, Guo [4 ]
Bernardi, Ana Paula [5 ]
Mariano, Ari Melo [4 ]
Holanda, Maristela [4 ]
机构
[1] Univ Brasilia UnB, Brasilia, DF, Brazil
[2] Fed Univ Piaui UFPI, Picos, Brazil
[3] Fed Inst Goias IFG, Grp Biol Studies & Res Cerrado NEPBIO, Goiania, Go, Brazil
[4] Univ Brasilia UnB, Dept Comp Sci, Brasilia, DF, Brazil
[5] Catholic Univ Brasilia UCB, Brasilia, DF, Brazil
关键词
Big Data; Bioinformatics; text mining; trend analysis;
D O I
暂无
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
The amount of biological data available for both the academic community and industry has increased due to the rise of high throughput omics technologies, biotechnology, and health monitoring. This scenario demands efficient storage and analysis of the massive amount of data involved. This work aimed to investigate the scientific literature to map topics related to the use of Big Data in Bioinformatics. Due to the large number of relevant papers to inspect, we employed a three-step data-driven systematic approach. We performed a literature search and selected works related to the theme in three search bases (Scopus, ACM, and Web of Science). Then, we proceeded to a text mining step to analyze terms frequently used in the documents and prepare the documents to be inspected. Afterward, we performed a topic modeling using the LDA (Latent Dirichlet Allocation) algorithm. Twenty groups of topics were obtained and drawn in twenty trend topics, which show a revealing state-of-the-art of the Big Data application in Bioinformatics.
引用
收藏
页码:1862 / 1867
页数:6
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