Molecular level investigation of organization in ternary lipid bilayer: A computational approach

被引:28
|
作者
Mondal, Sumita [1 ]
Mukhopadhyay, Chaitali [1 ]
机构
[1] Univ Calcutta, Dept Chem, Kolkata 700009, India
关键词
D O I
10.1021/la8015589
中图分类号
O6 [化学];
学科分类号
0703 ;
摘要
The differential organization of lipid components in a multicomponent membrane leads to formation of domains having diverse composition and size. Cholesterol and glycosphingolipids are known to be important components of such lateral assembly. We report here the ordering of cholesterol around ganglioside GM I and the nature of the cluster from an all-atom simulation of a ternary lipid system. The results are compared with a binary bilayer and a pure phospholipid bilayer. The difference in molecular rearrangements in ternary and binary lipid mixture shows the role of GM1 in the rearrangement of cholesterol. Calculation of the radial distribution function, rotational reorientation, and residence time analysis of cholesterol shows that cholesterol is preferentially accumulating near gangliosides, while the lateral translational motion, rotational diffusion, and order parameter of phospholipids characterize the amount of rigidity imparted on the phospholipid bilayer.
引用
收藏
页码:10298 / 10305
页数:8
相关论文
共 50 条
  • [31] Molecular dynamics simulations of the lipid bilayer edge
    Jiang, FY
    Bouret, Y
    Kindt, JT
    BIOPHYSICAL JOURNAL, 2004, 87 (01) : 182 - 192
  • [32] Lipid bilayer as mechanosensor: a molecular dynamics study
    Chachisvilis, Mirianas
    FASEB JOURNAL, 2011, 25
  • [33] MOLECULAR-OXYGEN IN A LIPID BILAYER MEMBRANE
    PLACHY, WZ
    WINDREM, D
    DROBNY, G
    BIOPHYSICAL JOURNAL, 1977, 17 (02) : A85 - A85
  • [34] Lipid bilayer binding of the antimicrobial peptide ovispirin-1: A molecular dynamics simulation investigation
    Khandelia, H
    Kaznessis, Y
    BIOPHYSICAL JOURNAL, 2004, 86 (01) : 42A - 42A
  • [35] Generation and Computational Characterization of a Complex Staphylococcus aureus Lipid Bilayer
    Joodaki, Faramarz
    Martin, Lenore M.
    Greenfield, Michael L.
    LANGMUIR, 2022, 38 (31) : 9481 - 9499
  • [36] Computational studies of insertion of ions into the interface of lipid bilayer membranes
    Yang, HJ
    Chiu, SW
    Subramaniam, S
    Scott, HL
    Jakobsson, E
    BIOPHYSICAL JOURNAL, 2000, 78 (01) : 182A - 182A
  • [37] Theoretical design of the cyclic lipopeptide nanotube as a molecular channel in the lipid bilayer, molecular dynamics and quantum mechanics approach
    Khavani, Mohammad
    Izadyar, Mohammad
    Housaindokht, Mohammad Reza
    PHYSICAL CHEMISTRY CHEMICAL PHYSICS, 2015, 17 (38) : 25536 - 25549
  • [38] Molecular dynamics simulation of a polyunsaturated lipid bilayer susceptible to lipid peroxidation
    Bachar, M
    Brunelle, P
    Tieleman, DP
    Rauk, A
    JOURNAL OF PHYSICAL CHEMISTRY B, 2004, 108 (22): : 7170 - 7179
  • [39] A Computational Approach for Deciphering the Organization of Glycosaminoglycans
    Spencer, Jean L.
    Bernanke, Joel A.
    Buczek-Thomas, Jo Ann
    Nugent, Matthew A.
    PLOS ONE, 2010, 5 (02):
  • [40] Analytical investigation of bilayer lipid biosensor based on graphene
    Akbari, Elnaz
    Buntat, Zolkafle
    Shahraki, Elmira
    Parvaz, Ramtin
    Kiani, Mohammad Javad
    JOURNAL OF BIOMATERIALS APPLICATIONS, 2016, 30 (06) : 677 - 685