A Systematic Phenotypic Screen of F-box Genes Through a Tissue-specific RNAi-based Approach in Drosophila

被引:13
|
作者
Dui, Wen [1 ,2 ,3 ]
Lu, Wei [2 ]
Ma, Jun [1 ,4 ]
Jiao, Renjie [2 ]
机构
[1] Cincinnati Childrens Res Fdn, Div Biomed Informat, Cincinnati, OH 45229 USA
[2] Chinese Acad Sci, Inst Biophys, State Key Lab Brain & Cognit Sci, Beijing 100101, Peoples R China
[3] Chinese Acad Sci, Grad Sch, Beijing 100080, Peoples R China
[4] Cincinnati Childrens Res Fdn, Div Dev Biol, Cincinnati, OH 45229 USA
基金
美国国家科学基金会; 中国国家自然科学基金;
关键词
Drosophila; F-box genes; Tissue-specific; RNAi-based; Phenotypic screen; UBIQUITIN-PROTEASOME PATHWAY; PROTEIN-INTERACTION MAP; CELL-CYCLE REGULATORS; SIGNALING PATHWAYS; DRUG DISCOVERY; EYELESS GENE; HISTONE H3; DEGRADATION; LIGASE; MELANOGASTER;
D O I
10.1016/j.jgg.2012.05.009
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
F-box proteins are components of the SCF (SkpA-Cullin 1-F-box) E3 ligase complexes, acting as the specificity-determinants in targeting substrate proteins for ubiquitination and degradation. In humans, at least 22 out of 75 F-box proteins have experimentally documented substrates, whereas in Drosophila 12 F-box proteins have been characterized with known substrates. To systematically investigate the genetic and molecular functions of F-box proteins in Drosophila, we performed a survey of the literature and databases. We identified 45 Drosophila genes that encode proteins containing at least one F-box domain. We collected publically available RNAi lines against these genes and used them in a tissue-specific RNAi-based phenotypic screen. Here, we present our systematic phenotypic dataset from the eye, the wing and the notum. This dataset is the first of its kind and represents a useful resource for future studies of the molecular and genetic functions of F-box genes in Drosophila. Our results show that, as expected, F-box genes in Drosophila have regulatory roles in a diverse array of processes including cell proliferation, cell growth, signal transduction, and cellular and animal survival.
引用
收藏
页码:397 / 413
页数:17
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