Somatic Copy Number Assessment in Tumors Based on Amplicon Coverage in a Targeted NGS Panel

被引:0
|
作者
Lefferts, J. A. [1 ,2 ]
Peterson, J. D. [1 ,2 ]
Turner, S. A. [1 ]
de Abreu, F. B. [1 ]
Tafe, L. J. [1 ]
Tsongalis, G. J. [1 ]
机构
[1] Dartmouth Hitchcock Med Ctr, Lebanon, NH 03766 USA
[2] Geisel Sch Med Dartmouth, Hanover, NH USA
来源
JOURNAL OF MOLECULAR DIAGNOSTICS | 2015年 / 17卷 / 06期
关键词
D O I
暂无
中图分类号
R36 [病理学];
学科分类号
100104 ;
摘要
I49
引用
收藏
页码:808 / 809
页数:2
相关论文
共 50 条
  • [21] Comparative analysis of multiple copy number alteration tools in the detection of amplifications and deletions on both whole-exome and targeted NGS panel platforms
    Virk, Selene M.
    Boyle, Sean Michael
    Alla, Ravi
    Yen, Jennifer
    Chen, Richard
    CANCER RESEARCH, 2017, 77
  • [22] NGS Copy Number Signatures in the Assessment of Cancers of Unknown Origin: Targeting Therapy
    Hollister, B.
    Lum, C.
    Halford, Z.
    Yip, J.
    Pon, J.
    Woron, A.
    JOURNAL OF MOLECULAR DIAGNOSTICS, 2022, 24 (10): : S114 - S114
  • [23] Amplicon-based NGS detects targeted variants in paired tissue and ctDNA samples
    Greer, Adam H.
    Mills, Glenn
    Yin, Hong
    CANCER RESEARCH, 2016, 76
  • [24] Utility of NGS MSI Calling Software in a 0.35 Mb Targeted Panel Utilizing Amplicon-Based Target Enrichment on an Ion Torrent Platform
    Sebastian, C. M.
    Gibson, J.
    D'Eletto, M.
    Walther, Z.
    JOURNAL OF MOLECULAR DIAGNOSTICS, 2019, 21 (06): : 1187 - 1187
  • [25] Determining Genetic Predispositions Using Ultrafast Amplicon-Based NGS Hereditary Cancer Panel
    Lee, L.
    Liu, Y. L.
    Pendleton, K.
    Lin, L.
    Liu, G.
    Liu, J.
    Liu, Z.
    JOURNAL OF MOLECULAR DIAGNOSTICS, 2019, 21 (03): : S23 - S23
  • [26] Performance Comparison of a Capture-Based Oncology NGS Panel with SNP Array and FISH for the Detection of Genome-Wide Copy Number Variants and Copy Number Neutral Loss of Heterozygosity
    Szankasi, P.
    Kellogg, A.
    Bolia, A.
    Paxton, C.
    O'Fallon, B.
    Rindler, P.
    Close, D.
    Li, P.
    Patel, J.
    JOURNAL OF MOLECULAR DIAGNOSTICS, 2022, 24 (10): : S30 - S30
  • [27] AMPLICON BASED PANEL TARGETED RESEQUENCING WITH THE TRUSIGHT MYELOID PANEL IN 100 PEDIATRIC AML PATIENTS
    Walter, C.
    Reinhardt, D.
    von Neuhoff, N.
    HAEMATOLOGICA, 2016, 101 : 671 - 671
  • [28] Spike-in NGS Controls for Copy Number Assessment and Improved LOD and VAF Confidence
    deAbreu, F. B.
    Deharvengt, S. J.
    Austermiller, B.
    Morrison, T.
    Tsongalis, G. J.
    Lefferts, J. A.
    JOURNAL OF MOLECULAR DIAGNOSTICS, 2018, 20 (06): : 1027 - 1027
  • [29] Reliability of algorithmic somatic copy number alteration detection from targeted capture data
    Rieber, Nora
    Bohnert, Regina
    Ziehm, Ulrike
    Jansen, Gunther
    BIOINFORMATICS, 2017, 33 (18) : 2791 - 2798
  • [30] Detection of Somatic Copy Number Alterations in Cancer Using Targeted Exome Capture Sequencing
    Lonigro, Robert J.
    Grasso, Catherine S.
    Robinson, Dan R.
    Jing, Xiaojun
    Wu, Yi-Mi
    Cao, Xuhong
    Quist, Michael J.
    Tomlins, Scott A.
    Pienta, Kenneth J.
    Chinnaiyan, Arul M.
    NEOPLASIA, 2011, 13 (11): : 1019 - U45