Genome-Wide Identification of the Invertase Gene Family in Populus

被引:56
|
作者
Chen, Zhong [1 ,2 ]
Gao, Kai [1 ,2 ]
Su, Xiaoxing [3 ]
Rao, Pian [1 ,2 ]
An, Xinmin [1 ,2 ]
机构
[1] Beijing Forestry Univ, Coll Biol Sci & Biotechnol, Natl Engn Lab Tree Breeding, Beijing, Peoples R China
[2] Beijing Forestry Univ, Coll Biol Sci & Biotechnol, Minist Educ, Key Lab Genet & Breeding Forest Trees & Ornamenta, Beijing, Peoples R China
[3] Beijing Berry Genom Co Ltd, Beijing, Peoples R China
来源
PLOS ONE | 2015年 / 10卷 / 09期
基金
中国国家自然科学基金; 国家高技术研究发展计划(863计划);
关键词
BETA-FRUCTOSIDASE; DIFFERENTIAL EXPRESSION; SUCROSE; POPLAR; ACCUMULATION; ARABIDOPSIS; EVOLUTION; PLANTS; GROWTH; FRUCTOFURANOSIDASE;
D O I
10.1371/journal.pone.0138540
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
Invertase plays a crucial role in carbohydrate partitioning and plant development as it catalyses the irreversible hydrolysis of sucrose into glucose and fructose. The invertase family in plants is composed of two sub-families: acid invertases, which are targeted to the cell wall and vacuole; and neutral/alkaline invertases, which function in the cytosol. In this study, 5 cell wall invertase genes (PtCWINV1-5), 3 vacuolar invertase genes (PtVINV1-3) and 16 neutral/alkaline invertase genes (PtNINV1-16) were identified in the Populus genome and found to be distributed on 14 chromosomes. A comprehensive analysis of poplar invertase genes was performed, including structures, chromosome location, phylogeny, evolutionary pattern and expression profiles. Phylogenetic analysis indicated that the two sub-families were both divided into two clades. Segmental duplication is contributed to neutral/alkaline sub-family expansion. Furthermore, the Populus invertase genes displayed differential expression in roots, stems, leaves, leaf buds and in response to salt/cold stress and pathogen infection. In addition, the analysis of enzyme activity and sugar content revealed that invertase genes play key roles in the sucrose metabolism of various tissues and organs in poplar. This work lays the foundation for future functional analysis of the invertase genes in Populus and other woody perennials.
引用
收藏
页数:21
相关论文
共 50 条
  • [21] Genome-wide identification of the NRAMP gene family in Populus trichocarpa and their function as heavy metal transporters
    Ma, Xiaocen
    Yang, Haobo
    Bu, Yufen
    Zhang, Yue
    Sun, Na
    Wu, Xinyuan
    Jing, Yanping
    ECOTOXICOLOGY AND ENVIRONMENTAL SAFETY, 2023, 261
  • [22] Genome-wide identification and expression profiling of invertase gene family for abiotic stresses tolerance in Poncirus trifoliata
    Dahro, Bachar
    Wang, Yue
    Alhag, Ahmed
    Li, Chunlong
    Guo, Dayong
    Liu, Ji-Hong
    BMC PLANT BIOLOGY, 2021, 21 (01)
  • [23] Genome-wide identification and expression profiling of invertase gene family for abiotic stresses tolerance in Poncirus trifoliata
    Bachar Dahro
    Yue Wang
    Ahmed Alhag
    Chunlong Li
    Dayong Guo
    Ji-Hong Liu
    BMC Plant Biology, 21
  • [24] Genome-wide survey and characterization of the WRKY gene family in Populus trichocarpa
    He, Hongsheng
    Dong, Qing
    Shao, Yuanhua
    Jiang, Haiyang
    Zhu, Suwen
    Cheng, Beijiu
    Xiang, Yan
    PLANT CELL REPORTS, 2012, 31 (07) : 1199 - 1217
  • [25] Genome-wide survey and characterization of the WRKY gene family in Populus trichocarpa
    Hongsheng He
    Qing Dong
    Yuanhua Shao
    Haiyang Jiang
    Suwen Zhu
    Beijiu Cheng
    Yan Xiang
    Plant Cell Reports, 2012, 31 : 1199 - 1217
  • [26] Genome-wide analysis of the Populus trichocarpa laccase gene family and functional identification of PtrLAC23
    Liao, Boyang
    Wang, Chencan
    Li, Xiaoxu
    Man, Yi
    Ruan, Hang
    Zhao, Yuanyuan
    FRONTIERS IN PLANT SCIENCE, 2023, 13
  • [27] Genome-wide identification of bHLH gene family and its response to cadmium stress in Populus x canescens
    Yao, Yuneng
    He, Zhengquan
    Li, Xinmeng
    Xu, Jing
    Han, Xiaojiao
    Liang, Hongwei
    Zhuo, Renying
    Qiu, Wenmin
    PEERJ, 2024, 12
  • [28] Genome-Wide Analysis of the Homeobox Gene Family and Identification of Drought-Responsive Members in Populus trichocarpa
    Hou, Jing
    Sun, Yan
    Wang, Lei
    Jiang, Yuanzhong
    Chen, Ningning
    Tong, Shaofei
    PLANTS-BASEL, 2021, 10 (11):
  • [29] Genome-Wide Identification, Classification, and Expression Analysis of 14-3-3 Gene Family in Populus
    Tian, Fengxia
    Wang, Tan
    Xie, Yuli
    Zhang, Jin
    Hu, Jianjun
    PLOS ONE, 2015, 10 (04):
  • [30] Genome-wide identification of the SWEET gene family in wheat
    Gao, Yue
    Wang, Zi Yuan
    Kumar, Vikranth
    Xu, Xiao Feng
    Yuan, De Peng
    Zhu, Xiao Feng
    Li, Tian Ya
    Jia, Baolei
    Xuan, Yuan Hu
    GENE, 2018, 642 : 284 - 292