Oceanisphaera arctica sp nov., isolated from Arctic marine sediment, and emended description of the genus Oceanisphaera

被引:14
|
作者
Srinivas, T. N. R. [1 ]
Reddy, P. Vishnu Vardhan [1 ]
Begum, Z. [1 ]
Manasa, P. [1 ]
Shivaji, S. [1 ]
机构
[1] Ctr Cellular & Mol Biol, Hyderabad 500007, Andhra Pradesh, India
关键词
HALOPHILIC BACTERIUM; IDENTIFICATION; MICROORGANISMS; ANTARCTICA; SEQUENCES; TOOL; DNA;
D O I
10.1099/ijs.0.036475-0
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
A novel Gram-staining-negative, coccoid, non-motile bacterium, designated strain V1-41(T), was isolated from a sample of marine sediment collected, at a depth of 200 m, from Kongsfjorden (an inlet on the west coast of Spitsbergen, an island that forms part of the Svalbard archipelago in the Arctic Ocean). The strain formed cream brown colonies on marine agar. Cells of the novel strain were positive in tests for catalase, oxidase, lysine decarboxylase and ornithine decarboxylase activities but negative for gelatinase and lipase activities. They hydrolysed aesculin, starch and urea, but not casein or DNA. Most of the cellular fatty acids were medium-chain and saturated (37.1%) or long-chain and unsaturated (27.8 %), with C-12:0 (37.1 %), C-18:1 omega 7C, and summed features 2 (19.3%) and 3 (24.1%) predominating. The major respiratory quinone was Q-8. The polar lipids consisted of phosphatidylethanolamine, phosphatidylglycerol, diphosphatidylglycerol, two unidentified aminophospholipids, four unidentified phospholipids and one other unidentified lipid. Phylogenetic analysis based on 16S rRNA gene sequences indicated that the novel strain's closest known relatives were Oceanisphaera litoralis DSM 15406(T) (98.5 % sequence similarity) and Oceanisphaera donghaensis BL1(T) (98.3%). In DNA-DNA hybridizations, however, the levels of relatedness between strain V1-41(T) and O. litoralis DSM 15406(T) and between the novel strain and O. donghaensis DSM 17589(T) were found to be only 19% and 29%, respectively. Based on these low levels of similarity at the DNA DNA level and the phenotypic and chemotaxonomic differences from O. litoralis DSM 15406(T) and O. donghaensis DSM 17589(T), strain V1-41(T) represents a novel species of the genus Oceanisphaera for which the name Oceanisphaera arctica sp. nov. is proposed. The type strain is V1-41(T) (=CCUG 58690(T)=KCTC 23013(T)=NBRC 106171(T)).
引用
收藏
页码:1926 / 1931
页数:6
相关论文
共 50 条
  • [11] Polaribacter huanghezhanensis sp nov., isolated from Arctic fjord sediment, and emended description of the genus Polaribacter
    Li, Hai
    Zhang, Xi-Ying
    Liu, Chang
    Lin, Chao-Yi
    Xu, Zhong
    Chen, Xiu-Lan
    Zhou, Bai-Cheng
    Shi, Mei
    Zhang, Yu-Zhong
    INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2014, 64 : 973 - 978
  • [12] Algimonas arctica sp nov., isolated from intertidal sand, and emended description of the genus Algimonas
    Liu, Chang
    Zhang, Xi-Ying
    Song, Xiao-Yan
    Su, Hai-Nan
    Qin, Qi-Long
    Xie, Bin-Bin
    Chen, Xiu-Lan
    Zhang, Yu-Zhong
    Shi, Mei
    INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2015, 65 : 3256 - 3261
  • [13] Arenibacter catalasegens sp nov., isolated from marine surface sediment, and emended description of the genus Arenibacter
    Li, An-Zhang
    Lin, Long-Zhen
    Zhang, Ming-Xia
    Lv, Yingying
    Zhu, Hong-Hui
    INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2018, 68 (03) : 758 - 763
  • [14] Gulosibacter chungangensis sp nov., an actinomycete isolated from a marine sediment, and emended description of the genus Gulosibacter
    Park, Mi-Hak
    Traiwan, Jitsopin
    Jung, Min Young
    Kim, Wonyong
    INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2012, 62 : 1055 - 1060
  • [15] Oceanisphaera pacifica sp. nov., isolated from the intestine of Trichiurus japonicus
    Jian-Heng Xue
    Li-Fang Shi
    Bei-Ning Zhang
    Wen-Jie Wu
    Yuan Gao
    Qian Zhu
    Li-Hua Zhao
    Archives of Microbiology, 2022, 204
  • [16] Oceanisphaera marina sp nov., isolated from a deep-sea seamount
    Liu, Jie
    Sun, Ya-Wen
    Zhang, Dan-Dan
    Li, Sheng-Nan
    Zhang, De-Chao
    INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2017, 67 (06) : 1996 - 2000
  • [17] Neptunomonas acidivorans sp nov., isolated from sediment, and emended description of the genus Neptunomonas
    Yang, Sung-Hyun
    Seo, Hyun-Seok
    Lee, Jung-Hyun
    Kim, Sang-Jin
    Kwon, Kae Kyoung
    INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2014, 64 : 3650 - 3654
  • [18] Lacinutrix himadriensis sp nov., a psychrophilic bacterium isolated from a marine sediment, and emended description of the genus Lacinutrix
    Srinivas, T. N. R.
    Prasad, S.
    Manasa, P.
    Sailaja, B.
    Begum, Z.
    Shivaji, S.
    INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2013, 63 : 729 - 734
  • [19] Pararhodobacter oceanensis sp. nov., isolated from marine intertidal sediment and emended description of the genus Pararhodobacter
    Wang, Xiao-Lin
    Zhao, Ya-Nan
    Wang, Kan
    Du, Zong-Jun
    INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2019, 69 (03) : 866 - 870
  • [20] Oceanisphaera pacifica sp. nov., isolated from the intestine of Trichiurus japonicus
    Xue, Jian-Heng
    Shi, Li-Fang
    Zhang, Bei-Ning
    Wu, Wen-Jie
    Gao, Yuan
    Zhu, Qian
    Zhao, Li-Hua
    ARCHIVES OF MICROBIOLOGY, 2022, 204 (06)