Detection of Campylobacter Species and Arcobacter butzleri in Stool Samples by Use of Real-Time Multiplex PCR

被引:43
|
作者
de Boer, Richard F. [1 ]
Ott, Alewijn [2 ]
Gueren, Pinar [1 ]
van Zanten, Evert [1 ]
van Belkum, Alex [3 ]
Kooistra-Smid, Anna M. D. [1 ,2 ]
机构
[1] Dept Res & Dev, Infect Dis Lab, Groningen, Netherlands
[2] Dept Med Microbiol, Infect Dis Lab, Groningen, Netherlands
[3] Erasmus MC, Univ Med Ctr, Dept Med Microbiol & Infect Dis, Rotterdam, Netherlands
关键词
INFECTIOUS INTESTINAL DISEASE; FECAL SAMPLES; UNITED-STATES; CONCISUS; PATHOGEN; GASTROENTERITIS; IDENTIFICATION; CRYAEROPHILUS; HUMANS; ASSAY;
D O I
10.1128/JCM.01716-12
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
The presence of Campylobacter (or Campylobacter-like) species in stools from patients suspected of infectious gastroenteritis (n = 493) was investigated using real-time PCR for detection of Arcobacter butzleri (hsp60 gene), Campylobacter coli (ceuE gene), Campylobacter jejuni (mapA), five acknowledged pathogenic Campylobacter spp. (C16S_Lund assay), and the Campylobacter genus (C16S_LvI assay). In total, 71.4% of the samples were positive for Campylobacter DNA (n = 352) by a Campylobacter genus-specific (C16S_LvI) assay. A total of 23 samples (4.7%) were positive in the C16S_Lund assay, used for detection of C. jejuni, C. coli, C. lari, C. upsaliensis, and C. hyointestinalis. Subsequent identification of these samples yielded detection frequencies (DF) of 4.1% (C. jejuni), 0.4% (C. coli), and 0.4% (C. upsaliensis). The DF of A. butzleri was 0.4%. Interestingly, sequencing of a subgroup (n = 46) of C16S_LvI PCR-positive samples resulted in a considerable number of Campylobacter concisus-positive samples (n = 20). PCR-positive findings with the C16S_Lund and C. jejuni/C. coli-specific assays were associated with more serious clinical symptoms (diarrhea and blood). Threshold cycle (C-T) values of C. jejuni/C. coli PCR-positive samples were comparable to those of the C16S_Lund PCR (P = 0.21). C-T values for both assays were significantly lower than those of the C16S_LvI assay (P < 0.001 and P < 0.00001, respectively). In conclusion, this study demonstrated that in combination, the C. jejuni/C coli-specific assays and the C16S_Lund assay are both useful for routine screening purposes. Furthermore, the DF of the emerging pathogen C. concisus was at least similar to the DF of C. jejuni.
引用
收藏
页码:253 / 259
页数:7
相关论文
共 50 条
  • [41] Development of multiplex real-time PCR for the detection of Plasmodium species in the BD MAX system
    Chen, M.
    Johannesson, G.
    Kjaeldgaard, P.
    Gomme, G.
    Kurtzhals, J. A.
    TROPICAL MEDICINE & INTERNATIONAL HEALTH, 2013, 18 : 158 - 158
  • [42] Multiplex PCR for identification of Campylobacter coli and Campylobacter jejuni from pure cultures and directly on stool samples
    Persson, S
    Olsen, KEP
    JOURNAL OF MEDICAL MICROBIOLOGY, 2005, 54 (11) : 1043 - 1047
  • [43] Validation of a Real-time PCR Assay for the Detection of Legionella Species in Respiratory Samples
    Cunningham, S. A.
    Sloan, L. M.
    Uhl, J. R.
    Nyre, L. M.
    Vetter, E. A.
    Cockerill, F. R.
    Patel, R.
    JOURNAL OF MOLECULAR DIAGNOSTICS, 2009, 11 (06): : 642 - 642
  • [44] Multiplex Real-Time PCR Method for Simultaneous Identification and Toxigenic Type Characterization of Clostridium difficile From Stool Samples
    Kilic, Abdullah
    Alam, Mohammad J.
    Tisdel, Naradah L.
    Shah, Dhara N.
    Yapar, Mehmet
    Lasco, Todd M.
    Garey, Kevin W.
    ANNALS OF LABORATORY MEDICINE, 2015, 35 (03) : 306 - 313
  • [45] Development of a real-time multiplex PCR assay for the detection of multiple Salmonella serotypes in chicken samples
    Edel O'Regan
    Evonne McCabe
    Catherine Burgess
    Sheila McGuinness
    Thomas Barry
    Geraldine Duffy
    Paul Whyte
    Séamus Fanning
    BMC Microbiology, 8
  • [46] Multiplex Real-Time PCR with HRM for Detection of Lactobacillus sakei and Lactobacillus curvatus in Food Samples
    Kurbakov, Konstantin A.
    Konorov, Evgenii A.
    Minaev, Mikhail Y.
    Kuznetsova, Oksana A.
    FOOD TECHNOLOGY AND BIOTECHNOLOGY, 2019, 57 (01) : 97 - 104
  • [47] Development of a real-time multiplex PCR assay for the detection of multiple Salmonella serotypes in chicken samples
    O'Regan, Edel
    McCabe, Evonne
    Burgess, Catherine
    McGuinness, Sheila
    Barry, Thomas
    Duffy, Geraldine
    Whyte, Paul
    Fanning, Seamus
    BMC MICROBIOLOGY, 2008, 8 (1)
  • [48] Real-time PCR using SYBR Green for the detection of Shigella spp. in food and stool samples
    Mokhtari, W.
    Nsaibia, S.
    Gharbi, A.
    Aouni, M.
    MOLECULAR AND CELLULAR PROBES, 2013, 27 (01) : 53 - 59
  • [49] Real-Time PCR for Detection of NDM-1 Carbapenemase Genes from Spiked Stool Samples
    Naas, Thierry
    Ergani, Ayla
    Carrer, Amelie
    Nordmann, Patrice
    ANTIMICROBIAL AGENTS AND CHEMOTHERAPY, 2011, 55 (09) : 4038 - 4043
  • [50] Comparison of Multiplex Nested PCR, In-house Real-Time PCR and Commercial Real-Time PCR Methods for the Detection of Plasmodium spp. from Blood Samples
    Usluca, Selma
    Celebi, Bekir
    MIKROBIYOLOJI BULTENI, 2020, 54 (02): : 306 - 317