Identification and genetic variation among eight varieties of ginger by using random amplified polymorphic DNA markers

被引:20
|
作者
Palai, Siddharth Kumar [1 ]
Rout, Gyana Ranjan [1 ]
机构
[1] Reg Plant Resource Ctr, Plant Biotechnol Div, Bhubaneswar 751015, Orissa, India
关键词
Ginger; genetic variation; RAPD;
D O I
10.5511/plantbiotechnology.24.417
中图分类号
Q81 [生物工程学(生物技术)]; Q93 [微生物学];
学科分类号
071005 ; 0836 ; 090102 ; 100705 ;
摘要
Identification and characterization of germplasm is an important link between the conservation and utilization of plant genetic resources. The present investigation was undertaken for identification and genetic variation within eight high yielding varieties of ginger through RAPD markers. A total of 55 distinct DNA fragments ranging from 0.5-2.4 Kb were amplified by using twelve selected primers. The cluster analysis indicated that the eight varieties formed two major clusters. The first major cluster had only one variety 'S-558' with 43% similarity with other seven varieties. Second major cluster having seven varieties and divided into two minor clusters. One minor cluster had six varieties ('Jugijan', 'Turia local', 'Nadia', 'Zo-17', 'Nahfrey' and 'Gurubathan) and other having only one variety 'Surabhi'. The second minor cluster further divided into two sub-minor clusters. 'Nadia' and 'ZO-17' had 78% similarity among themselves and 70% similarity with 'Jugijan' and 'Turia local'. 'Jugijan' and 'Turia local' were having 81% similarity among themselves. However, 'Nahfrey' had 64% similarity with 'Jugijan', 'Turia local', 'Nadia' and 'ZO-17'. The present study showed the distant variation within the varieties. This investigation will help to breeders for ginger improvement program.
引用
收藏
页码:417 / 420
页数:4
相关论文
共 50 条
  • [21] Use of random amplified polymorphic DNA markers for the detection of genetic variation in Phytophthora cinnamomi in Taiwan
    Chang, TT
    Yang, WW
    Wang, WY
    BOTANICAL BULLETIN OF ACADEMIA SINICA, 1996, 37 (03): : 165 - 171
  • [22] USE OF RANDOM AMPLIFIED POLYMORPHIC DNA MARKERS FOR THE DETECTION OF GENETIC-VARIATION IN MAGNAPORTHE POAE
    HUFF, DR
    BUNTING, TE
    PLUMLEY, KA
    PHYTOPATHOLOGY, 1994, 84 (11) : 1312 - 1316
  • [23] Genetic Diversity and Phylogenetic Relationship among Some Rabbit Breeds Using Random Amplified Polymorphic DNA Markers
    El-Bayomi, Kh. M.
    Awad, A.
    Saleh, A. A.
    LIFE SCIENCE JOURNAL-ACTA ZHENGZHOU UNIVERSITY OVERSEAS EDITION, 2013, 10 (01): : 1449 - 1457
  • [24] Genetic diversity and identification of cymbidium cultivars as measured by random amplified polymorphic DNA (RAPD) markers
    Obara-Okeyo, P
    Kako, S
    EUPHYTICA, 1998, 99 (02) : 95 - 101
  • [25] GENETIC VARIABILITY ESTIMATION IN WHEAT USING RANDOM AMPLIFIED POLYMORPHIC DNA BASED MARKERS
    Niaz, Shabnam
    Nawaz, Sehar
    Butt, Aisha
    Bilal, Muhammad Qamar
    Mubin, Muhammad
    ul Rehman, Shah Nawaz
    Akram, Ayesha
    Latif, Muhammad Faizan
    Iqbal, M. Ahsan
    Tabassum, Saba
    Saleem, Fozia
    Ahmed, Nisar
    PAKISTAN JOURNAL OF AGRICULTURAL SCIENCES, 2020, 57 (03): : 685 - 690
  • [26] Genetic diversity and identification of cymbidium cultivars as measured by random amplified polymorphic DNA (RAPD) markers
    P. Obara-Okeyo
    S. Kako
    Euphytica, 1998, 99 : 95 - 101
  • [27] Genetic relationships among Rosa species based on random amplified polymorphic DNA (RAPD) markers
    Mirzaei, Leila
    Rahmani, Fatemeh
    AFRICAN JOURNAL OF BIOTECHNOLOGY, 2011, 10 (55): : 11373 - 11377
  • [28] Genetic relatedness among strains of Heterobasidion annosum as detected by random amplified polymorphic DNA markers
    Karjalainen, R
    JOURNAL OF PHYTOPATHOLOGY, 1996, 144 (7-8) : 399 - 404
  • [29] Genetic variation and cultivar identification of Jamaican yam germplasm by random amplified polymorphic DNA analysis
    Asemota, HN
    Ramser, J
    LopezPeralta, C
    Weising, K
    Kahl, G
    EUPHYTICA, 1996, 92 (03) : 341 - 351
  • [30] Analysis of genetic variation among some Turkish oaks using random amplified polymorphic DNA (RAPD) method
    Yilmaz, Aykut
    JOURNAL OF BIOTECHNOLOGY, 2016, 231 : S17 - S18