'Leveling' the playing field for analyses of single-base resolution DNA methylomes

被引：229
|
作者：
Schultz, Matthew D. [1 ,2 ]
Schmitz, Robert J. [2 ]
Ecker, Joseph R. [1 ,3 ]
机构：
[1] Salk Inst Biol Studies, Genom Anal Lab, La Jolla, CA 92037 USA
[2] Univ Calif San Diego, Bioinformat Program, La Jolla, CA 92093 USA
[3] Salk Inst Biol Studies, Howard Hughes Med Inst, La Jolla, CA 92037 USA
来源：
TRENDS IN GENETICS | 2012年 / 28卷 / 12期
关键词：
DNA methylation; bisulfite sequencing; methylation level; epigenomics; ARABIDOPSIS;
D O I：
10.1016/j.tig.2012.10.012
中图分类号：
Q3 [遗传学];
学科分类号：
071007 ; 090102 ;
摘要：
引用
收藏
页码：583 / 585
页数：3
相关论文
共 50 条
  • [21] Integrated Transcriptome Analysis and Single-Base Resolution Methylomes of Watermelon (Citrullus lanatus) Reveal Epigenome Modifications in Response to Osmotic Stress
    Zhu, Fangming
    Li, Mingyan
    Yan, Manwen
    Qiao, Fei
    Jiang, Xuefei
    FRONTIERS IN PLANT SCIENCE, 2021, 12
  • [22] Conservation and divergence of DNA methylation in eukaryotes New insights from single base-resolution DNA methylomes
    Su, Zhixi
    Han, Leng
    Zhao, Zhongming
    EPIGENETICS, 2011, 6 (02) : 134 - 140
  • [23] Single-base resolution methylomes of somatic embryogenesis in Theobroma cacao L. reveal epigenome modifications associated with somatic embryo abnormalities
    Claudia Garcia
    Alex-Alan Furtado de Almeida
    Marcio Costa
    Dahyana Britto
    Fabio Correa
    Pedro Mangabeira
    Lidiane Silva
    Jose Silva
    Stefan Royaert
    Jean-Philippe Marelli
    Scientific Reports, 12
  • [24] Single-base resolution analysis of DNA methylation in fibromyalgia women compared with their healthy sisters
    Gerra, Maria Carla
    Pedersen, Inge Sokilde
    Carnevali, Davide
    Gonzalez-Villar, Alberto
    Trinanes, Yolanda
    Pidal-Miranda, Marina
    Arendt-Nielsen, Lars
    Teresa Carrillo-de-la-Pena, Maria
    CLINICAL AND EXPERIMENTAL RHEUMATOLOGY, 2019, 37 (01) : S130 - S130
  • [25] Single-base resolution analysis of DNA epigenome via high-throughput sequencing
    Peng, Jinying
    Xia, Bo
    Yi, Chengqi
    SCIENCE CHINA-LIFE SCIENCES, 2016, 59 (03) : 219 - 226
  • [26] Single-base resolution analysis of DNA epigenome via high-throughput sequencing
    Jinying Peng
    Bo Xia
    Chengqi Yi
    Science China Life Sciences, 2016, 59 : 219 - 226
  • [27] Single-base resolution analysis of DNA epigenome via high-throughput sequencing
    Jinying Peng
    Bo Xia
    Chengqi Yi
    Science China(Life Sciences), 2016, 59 (03) : 219 - 226
  • [28] Selective Chemical Labeling and Sequencing of 5-Hydroxymethylcytosine in DNA at Single-Base Resolution
    Li, Xiaogang
    Shi, Xinxin
    Gong, Yin
    Guo, Wenting
    Liu, Yuanrui
    Peng, Chunwei
    Xu, Yingchun
    FRONTIERS IN GENETICS, 2021, 12
  • [29] Selective Chemical Labeling and Sequencing of 5-Carboxylcytosine in DNA at Single-Base Resolution
    Xie, Yalun
    Wang, Yafen
    He, Zhiyong
    Yang, Wei
    Fu, Boshi
    Zou, Guangrong
    Zhang, Xiong
    Huang, Jinguo
    Zhou, Xiang
    ANALYTICAL CHEMISTRY, 2020, 92 (18) : 12710 - 12715
  • [30] Human DNA methylomes at base resolution show widespread epigenomic differences
    Lister, Ryan
    Pelizzola, Mattia
    Dowen, Robert H.
    Hawkins, R. David
    Hon, Gary
    Tonti-Filippini, Julian
    Nery, Joseph R.
    Lee, Leonard
    Ye, Zhen
    Ngo, Que-Minh
    Edsall, Lee
    Antosiewicz-Bourget, Jessica
    Stewart, Ron
    Ruotti, Victor
    Millar, A. Harvey
    Thomson, James A.
    Ren, Bing
    Ecker, Joseph R.
    NATURE, 2009, 462 (7271) : 315 - 322
12345