Assessing the performance of density functional theory for the dynamic polarizabilities of amino acids: Treatment of correlation and role of exact exchange

被引:7
|
作者
Alipour, Mojtaba [1 ]
Mohajeri, Afshan [1 ]
机构
[1] Shiraz Univ, Dept Chem, Coll Sci, Shiraz 71454, Iran
关键词
density functional theory; exchange; correlation; dynamic polarizability; amino acid; FREQUENCY-DEPENDENT POLARIZABILITIES; GENERALIZED-GRADIENT-APPROXIMATION; GAS-PHASE; AB-INITIO; NONCOVALENT INTERACTIONS; THERMOCHEMICAL KINETICS; DIPOLE POLARIZABILITY; ADJUSTABLE-PARAMETERS; PROTON AFFINITIES; ELECTRIC-DIPOLE;
D O I
10.1002/qua.24406
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070304 ; 081704 ;
摘要
The theoretical determination of electric response properties of the biological systems is a field where the application of density functional theory (DFT) appears to be quite promising. In this work, the performance of 41 density functional methods is evaluated in predicting dynamic polarizabilities of an experimental benchmark set of 20 proteinogenic amino acids. The behavior of a large number of density functionals, including various types of the local spin density approximation (LSDA), generalized gradient approximation (GGA), meta-GGA (m-GGA), hybrid-GGA (h-GGA), hybrid meta-GGA (hm-GGA), and range-separated hybrid-GGA (rsh-GGA), has been assessed for the purpose. Analyzing the results of our DFT benchmarking, we found that these computationally economical methods show very diverse predictive capability and a careful selection of DFT functionals is very important in the polarizability calculations. Considering the role of exchange, correlation, dispersion and long-range corrections, it turned out that in the LSDA class, SVWN3 gives better results than SPL and SVWN5 toward the reference values. Of the GGA methods, OPBE outperforms all other functionals. The M06-L is the best method of m-GGA class. The B3LYP and TPSSh are the best functionals of h-GGA and hm-GGA lineages, respectively. Finally, CAM-B3LYP is the best method of rsh-GGA functionals that predicts the most accurate polarizability for amino acids by a large margin with respect to others. Overall, the best performing functionals turn out to be hm-GGAs TPSSh, TPSS1KCIS, M05, tau-HCTHhyb, and h-GGA B3LYP. Hopefully, the results of this investigation might provide the useful guidance to propose a new exchange-correlation functional for calculating the optical properties of biomolecular materials. (c) 2013 Wiley Periodicals, Inc.
引用
收藏
页码:1803 / 1811
页数:9
相关论文
共 50 条
  • [31] Exchange and correlation energy functional in the current-density functional theory
    Higuchi, K
    Higuchi, M
    PHYSICA B-CONDENSED MATTER, 2002, 312 : 534 - 536
  • [32] Frequency Dependence of the Exact Exchange-Correlation Kernel of Time-Dependent Density-Functional Theory
    Thiele, M.
    Kuemmel, S.
    PHYSICAL REVIEW LETTERS, 2014, 112 (08)
  • [33] Exact exchange-correlation potentials in spin-density functional theory and their discontinuities at unit electron number
    Perdew, John P.
    Sagvolden, Espen
    CANADIAN JOURNAL OF CHEMISTRY-REVUE CANADIENNE DE CHIMIE, 2009, 87 (10): : 1268 - 1272
  • [34] Chiroptical Properties of Amino Acids: A Density Functional Theory Study
    Adrian-Scotto, Martine
    Antonczak, Serge
    Bredehoeft, Jan Hendrik
    Hoffmann, Soren V.
    Meierhenrich, Uwe J.
    SYMMETRY-BASEL, 2010, 2 (02): : 935 - 949
  • [35] Antioxidant properties of α-amino acids: a density functional theory viewpoint
    Buglak, Andrey A.
    FREE RADICAL RESEARCH, 2024, 58 (6-7) : 380 - 387
  • [36] The role of the basis set: Assessing density functional theory
    Boese, AD
    Martin, JML
    Handy, NC
    JOURNAL OF CHEMICAL PHYSICS, 2003, 119 (06): : 3005 - 3014
  • [37] Electron correlation and the structure of the exchange-correlation potential and the correlation energy density in density functional theory
    Baerends, EJ
    Gritsenko, O
    vanLeeuwen, R
    NEW METHODS IN QUANTUM THEORY, 1996, 8 : 395 - 413
  • [38] Alternative separation of exchange and correlation in density-functional theory
    Armiento, R
    Mattsson, AE
    PHYSICAL REVIEW B, 2003, 68 (24)
  • [39] LIBXC: A library of exchange and correlation functionals for density functional theory
    Marques, Miguel A. L.
    Oliveira, Micael J. T.
    Burnus, Tobias
    COMPUTER PHYSICS COMMUNICATIONS, 2012, 183 (10) : 2272 - 2281
  • [40] Patching the Exchange-Correlation Potential in Density Functional Theory
    Huang, Chen
    JOURNAL OF CHEMICAL THEORY AND COMPUTATION, 2016, 12 (05) : 2224 - 2233