Characterization of Multiple Alginate Lyases in a Highly Efficient Alginate-Degrading Vibrio Strain and Its Degradation Strategy

被引:9
|
作者
He, Xinxin [1 ,2 ,4 ]
Zhang, Yunhui [1 ,2 ,4 ]
Wang, Xiaolei [1 ,2 ]
Zhu, Xiaoyu [1 ,2 ,4 ]
Chen, Leiran [1 ,2 ]
Liu, Weizhi [1 ,2 ]
Lyu, Qianqian [1 ,2 ]
Ran, Lingman [1 ,2 ,4 ]
Cheng, Haojin [1 ,2 ,4 ]
Zhang, Xiao-Hua [1 ,2 ,3 ,4 ]
机构
[1] Ocean Univ China, Frontiers Sci Ctr Deep Ocean Multispheres & Earth, Qingdao, Peoples R China
[2] Ocean Univ China, Coll Marine Life Sci, Qingdao, Peoples R China
[3] Qingdao Natl Lab Marine Sci & Technol, Lab Marine Ecol & Environm Sci, Qingdao, Peoples R China
[4] Ocean Univ China, Inst Evolut & Marine Biodivers, Qingdao, Peoples R China
基金
中国国家自然科学基金;
关键词
Vibrio pelegius; alginate lyases; alginate degradation mechanism; outer membrane vesicles; OMVs; OUTER-MEMBRANE VESICLES; MARINE BACTERIUM; BROWN-ALGAE; URONIC-ACID; PREDICTION; PROTEINS; SEQUENCE; GENES; METABOLISM; INSIGHTS;
D O I
10.1128/aem.01389-22
中图分类号
Q81 [生物工程学(生物技术)]; Q93 [微生物学];
学科分类号
071005 ; 0836 ; 090102 ; 100705 ;
摘要
Alginate is an important carbon source in the marine environment, and vibrios are major alginate utilizers. Previous studies focused only on the characteristics of individual alginate lyases in vibrios, but few of them discussed the comprehensive alginate-degrading strategy. Alginate is an important polysaccharide in the ocean that supports the growth of marine microorganisms. Many widespread Vibrio species possess alginate lyases and can utilize alginate as a carbon source, but the detailed alginate degradation mechanism in Vibrio remains to be further explored. In this study, we obtained a highly efficient alginate-degrading strain, Vibrio pelagius WXL662, with 11 alginate lyases (VpAly-I to -XI) and further elucidated its molecular mechanism of alginate degradation. Three alginate utilization loci (AUL) were identified in different parts of WXL662's genome, comprising six alginate lyases (VpAly-I, -II, -VIII, -IX, -X, and -XI) and other genes related to alginate degradation. Most of the alginate-degrading genes are strongly induced when alginate is provided as the sole carbon source. Ten alginate lyases (VpAly-I to -X) had been purified and characterized, including six from polysaccharide lyase family 7 (PL7), three from PL17, and one from PL6. These recombinant alginate lyases existing in different cellular locations were active at a wide temperature (10 to 50 degrees C) and pH (4.0 to 9.0) range, with different substrate preferences and diverse degradation products, enabling WXL662 to efficiently utilize alginate in a changing marine environment. Importantly, outer membrane vesicles (OMVs) can act as vectors for alginate lyases (VpAly-II, -V, and -VI) in WXL662. Further investigations of public Vibrio genomes revealed that most alginate-degrading vibrios possess one AUL instead of previously reported "scattered" system. These results emphasize the specific alginate degradation strategy in Vibrio pelagius WXL662, which can be used as a model strain to study the ecological importance of effective alginate-degrading vibrios in the ocean.IMPORTANCE Alginate is an important carbon source in the marine environment, and vibrios are major alginate utilizers. Previous studies focused only on the characteristics of individual alginate lyases in vibrios, but few of them discussed the comprehensive alginate-degrading strategy. Here, we depicted the alginate utilization mechanism and its ecological implications of a highly efficient alginate-degrading Vibrio strain, WXL662, which contained 11 alginate lyases with distinct enzymatic characteristics. Importantly, unlike other vibrios with only one alginate utilization locus (AUL) or the previously reported "scattered" system, three AUL were identified in WXL662. Additionally, the involvement of outer membrane vesicles (OMVs) in the secretion of alginate lyases is proposed for the first time.
引用
收藏
页数:17
相关论文
共 46 条
  • [31] Characterization of an Alginate Lyase, FlAlyA, from Flavobacterium sp Strain UMI-01 and Its Expression in Escherichia coli
    Inoue, Akira
    Takadono, Kohei
    Nishiyama, Ryuji
    Tajima, Kenji
    Kobayashi, Takanori
    Ojima, Takao
    MARINE DRUGS, 2014, 12 (08): : 4693 - 4712
  • [32] Construction of immobilized laccase hydrogels via sodium alginate-dopamine/polyethylene glycol and its efficient degradation of dyeing wastewater
    Su, Xiaolei
    Yang, Xue
    Long, Hao
    Li, Yahao
    Sun, Weiyang
    Mo, Taoling
    Lyu, Hongxiang
    Cavaco-Paulo, Artur
    Wang, Hongbo
    Su, Jing
    INTERNATIONAL JOURNAL OF BIOLOGICAL MACROMOLECULES, 2024, 279
  • [33] Isolation and characterization of a 9-fluorenone-degrading bacterial strain and its role in synergistic degradation of fluorene by a consortium
    Casellas, M
    Grifoll, M
    Sabaté, J
    Solanas, AM
    CANADIAN JOURNAL OF MICROBIOLOGY, 1998, 44 (08) : 734 - 742
  • [34] Novel Alginate Lyase (Aly5) from a Polysaccharide-Degrading Marine Bacterium, Flammeovirga sp Strain MY04: Effects of Module Truncation on Biochemical Characteristics, Alginate Degradation Patterns, and Oligosaccharide-Yielding Properties
    Han, Wenjun
    Gu, Jingyan
    Cheng, Yuanyuan
    Liu, Huihui
    Li, Yuezhong
    Li, Fuchuan
    APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 2016, 82 (01) : 364 - 374
  • [35] Purification and characterization of bifunctional alginate lyase from Alteromonas sp strain no. 272 and its action on saturated oligomeric substrates
    Iwamoto, Y
    Araki, R
    Iriyama, K
    Oda, T
    Fukuda, H
    Hayashida, S
    Muramatsu, T
    BIOSCIENCE BIOTECHNOLOGY AND BIOCHEMISTRY, 2001, 65 (01) : 133 - 142
  • [36] Synthesis, characterization and photocatalytic activity of alginate based hybrid material for efficient degradation of organic pollutants under UV light and sunlight irradiation
    Valiyathur, M. D. Furqaan
    Raza, A. Ahmed
    Kottur, Anver Basha
    Sakvai, Mohammed Safiullah
    CARBOHYDRATE POLYMERS, 2024, 343
  • [37] Isolation and Identification of an Efficient Aerobic Denitrifying Pseudomonas stutzeri Strain and Characterization of Its Nitrite Degradation
    Fu, Weilai
    Wang, Qiang
    Chen, Shuhui
    Wang, Yunshuang
    Wang, Yaru
    Duan, Peifeng
    Yi, Ganfeng
    Liu, Chao
    Zhang, Xian
    Rao, Zhiming
    CATALYSTS, 2021, 11 (10)
  • [38] Characterization and Genomic Analysis of a Highly Efficient Dibutyl Phthalate-Degrading Bacterium Gordonia sp Strain QH-12
    Jin, Decai
    Kong, Xiao
    Liu, Huijun
    Wang, Xinxin
    Deng, Ye
    Jia, Minghong
    Yu, Xiangyang
    INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES, 2016, 17 (07)
  • [39] Characterization of potential probiotic strain, L. reuteri B2, and its microencapsulation using alginate-based biopolymers
    Popovic, Mina
    Stojanovic, Marijana
    Velickovic, Zlate
    Kovacevic, Ana
    Miljkovic, Radmila
    Mirkovic, Nemanja
    Marinkovic, Aleksandar
    INTERNATIONAL JOURNAL OF BIOLOGICAL MACROMOLECULES, 2021, 183 : 423 - 434
  • [40] Efficient biodegradation of multiple pyrethroid pesticides by Rhodococcus pyridinivorans strain Y6 and its degradation mechanism
    Huang, Yaohua
    Chen, Shao-Fang
    Chen, Wen -Juan
    Zhu, Xixian
    Mishra, Sandhya
    Bhatt, Pankaj
    Chen, Shaohua
    CHEMICAL ENGINEERING JOURNAL, 2023, 469