Characterization of Multiple Alginate Lyases in a Highly Efficient Alginate-Degrading Vibrio Strain and Its Degradation Strategy

被引:8
|
作者
He, Xinxin [1 ,2 ,4 ]
Zhang, Yunhui [1 ,2 ,4 ]
Wang, Xiaolei [1 ,2 ]
Zhu, Xiaoyu [1 ,2 ,4 ]
Chen, Leiran [1 ,2 ]
Liu, Weizhi [1 ,2 ]
Lyu, Qianqian [1 ,2 ]
Ran, Lingman [1 ,2 ,4 ]
Cheng, Haojin [1 ,2 ,4 ]
Zhang, Xiao-Hua [1 ,2 ,3 ,4 ]
机构
[1] Ocean Univ China, Frontiers Sci Ctr Deep Ocean Multispheres & Earth, Qingdao, Peoples R China
[2] Ocean Univ China, Coll Marine Life Sci, Qingdao, Peoples R China
[3] Qingdao Natl Lab Marine Sci & Technol, Lab Marine Ecol & Environm Sci, Qingdao, Peoples R China
[4] Ocean Univ China, Inst Evolut & Marine Biodivers, Qingdao, Peoples R China
基金
中国国家自然科学基金;
关键词
Vibrio pelegius; alginate lyases; alginate degradation mechanism; outer membrane vesicles; OMVs; OUTER-MEMBRANE VESICLES; MARINE BACTERIUM; BROWN-ALGAE; URONIC-ACID; PREDICTION; PROTEINS; SEQUENCE; GENES; METABOLISM; INSIGHTS;
D O I
10.1128/aem.01389-22
中图分类号
Q81 [生物工程学(生物技术)]; Q93 [微生物学];
学科分类号
071005 ; 0836 ; 090102 ; 100705 ;
摘要
Alginate is an important carbon source in the marine environment, and vibrios are major alginate utilizers. Previous studies focused only on the characteristics of individual alginate lyases in vibrios, but few of them discussed the comprehensive alginate-degrading strategy. Alginate is an important polysaccharide in the ocean that supports the growth of marine microorganisms. Many widespread Vibrio species possess alginate lyases and can utilize alginate as a carbon source, but the detailed alginate degradation mechanism in Vibrio remains to be further explored. In this study, we obtained a highly efficient alginate-degrading strain, Vibrio pelagius WXL662, with 11 alginate lyases (VpAly-I to -XI) and further elucidated its molecular mechanism of alginate degradation. Three alginate utilization loci (AUL) were identified in different parts of WXL662's genome, comprising six alginate lyases (VpAly-I, -II, -VIII, -IX, -X, and -XI) and other genes related to alginate degradation. Most of the alginate-degrading genes are strongly induced when alginate is provided as the sole carbon source. Ten alginate lyases (VpAly-I to -X) had been purified and characterized, including six from polysaccharide lyase family 7 (PL7), three from PL17, and one from PL6. These recombinant alginate lyases existing in different cellular locations were active at a wide temperature (10 to 50 degrees C) and pH (4.0 to 9.0) range, with different substrate preferences and diverse degradation products, enabling WXL662 to efficiently utilize alginate in a changing marine environment. Importantly, outer membrane vesicles (OMVs) can act as vectors for alginate lyases (VpAly-II, -V, and -VI) in WXL662. Further investigations of public Vibrio genomes revealed that most alginate-degrading vibrios possess one AUL instead of previously reported "scattered" system. These results emphasize the specific alginate degradation strategy in Vibrio pelagius WXL662, which can be used as a model strain to study the ecological importance of effective alginate-degrading vibrios in the ocean.IMPORTANCE Alginate is an important carbon source in the marine environment, and vibrios are major alginate utilizers. Previous studies focused only on the characteristics of individual alginate lyases in vibrios, but few of them discussed the comprehensive alginate-degrading strategy. Here, we depicted the alginate utilization mechanism and its ecological implications of a highly efficient alginate-degrading Vibrio strain, WXL662, which contained 11 alginate lyases with distinct enzymatic characteristics. Importantly, unlike other vibrios with only one alginate utilization locus (AUL) or the previously reported "scattered" system, three AUL were identified in WXL662. Additionally, the involvement of outer membrane vesicles (OMVs) in the secretion of alginate lyases is proposed for the first time.
引用
收藏
页数:17
相关论文
共 46 条
  • [1] Alginate Lyases from Alginate-Degrading Vibrio splendidus 12B01 Are Endolytic
    Badur, Ahmet H.
    Jagtap, Sujit Sadashiv
    Yalamanchili, Geethika
    Lee, Jung-Kul
    Zhao, Huimin
    Rao, Christopher V.
    APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 2015, 81 (05) : 1856 - 1864
  • [2] ISOLATION OF AN ALGINATE-DEGRADING ORGANISM AND PURIFICATION OF ITS ALGINATE LYASE
    KINOSHITA, S
    KUMOI, Y
    OHSHIMA, A
    YOSHIDA, T
    KASAI, N
    JOURNAL OF FERMENTATION AND BIOENGINEERING, 1991, 72 (02): : 74 - 78
  • [3] Isolation and characterization of alginate-degrading bacteria Sinomicrobium oceani
    Jegatheesan, A.
    Sudhakar, M. P.
    Poonam, C.
    Perumal, K.
    Arunkumar, K.
    BIOMASS CONVERSION AND BIOREFINERY, 2017, 7 (01) : 51 - 58
  • [4] Isolation and characterization of alginate-degrading bacteria Sinomicrobium oceani
    A. Jegatheesan
    M. P. Sudhakar
    C. Poonam
    K. Perumal
    K. Arunkumar
    Biomass Conversion and Biorefinery, 2017, 7 : 51 - 58
  • [5] Isolation and characterization of alginate-degrading bacteria for disposal of seaweed wastes
    Tang, J. -C.
    Taniguchi, H.
    Chu, H.
    Zhou, Q.
    Nagata, S.
    LETTERS IN APPLIED MICROBIOLOGY, 2009, 48 (01) : 38 - 43
  • [6] Highly Selective Fermentation of Waste-Activated Sludge by Alginate-Degrading Consortia
    Qian, Ding-Kang
    Geng, Zi-Qian
    Tang, Jie
    Wang, Shuai
    Hu, Zhi-Yi
    Dai, Kun
    van Loosdrecht, Mark C. M.
    Zeng, Raymond Jianxiong
    Zhang, Fang
    ACS ES&T ENGINEERING, 2021, 1 (11): : 1606 - 1617
  • [7] Unraveling the molecular mechanism of polysaccharide lyases for efficient alginate degradation
    Rivas-Fernandez, Jose Pablo
    Vuillemin, Marlene
    Pilgaard, Bo
    Klau, Leesa J.
    Fredslund, Folmer
    Lund-Hanssen, Charlotte
    Welner, Ditte H.
    Meyer, Anne S.
    Morth, J. Preben
    Meilleur, Flora
    Aachmann, Finn L.
    Rovira, Carme
    Wilkens, Casper
    NATURE COMMUNICATIONS, 2025, 16 (01)
  • [8] Characterization of the alginate lyases from Vibrio splendidus 12B01
    Badur, Ahmet
    Yalamanchali, Geethika
    Rao, Christopher
    ABSTRACTS OF PAPERS OF THE AMERICAN CHEMICAL SOCIETY, 2015, 249
  • [9] FINE-STRUCTURE OF SMG ALGINATE FRAGMENT IN LIGHT OF ITS DEGRADATION BY ALGINATE LYASES OF PSEUDOMONAS SP
    MIN, KH
    SASAKI, SF
    KASHIWABARA, Y
    UMEKAWA, M
    NISIZAWA, K
    JOURNAL OF BIOCHEMISTRY, 1977, 81 (03): : 555 - 562
  • [10] ALGINATE-DEGRADING ENZYMES .5. CHEMICAL-COMPOSITION OF ALGINATE LYASES FROM THE MIDGUT GLAND OF TURBO-CORNUTUS AND CHEMICAL MODIFICATION OF CYS, TRP AND LYS RESIDUES
    MURAMATSU, T
    EGAWA, K
    AGRICULTURAL AND BIOLOGICAL CHEMISTRY, 1982, 46 (04): : 883 - 889