Examining Ionic Liquid Effects on Mononuclear Rearrangement of Heterocycles Using QM/MM Simulations

被引:9
|
作者
Allen, Caley [1 ]
Ghebreab, Robel [1 ]
Doherty, Brian [1 ]
Li, Bin [1 ]
Acevedo, Orlando [1 ]
机构
[1] Univ Miami, Dept Chem, Coral Gables, FL 33146 USA
来源
JOURNAL OF PHYSICAL CHEMISTRY B | 2016年 / 120卷 / 41期
基金
美国国家科学基金会;
关键词
Z-PHENYLHYDRAZONE; MONTE-CARLO; 5-AMINO-3-BENZOYL-1,2,4-OXADIAZOLE; REACTIVITY; DYNAMICS; BENZENE; WATER; ACID; Z-2,4-DINITROPHENYLHYDRAZONE; ACETONITRILE;
D O I
10.1021/acs.jpcb.6b07205
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070304 ; 081704 ;
摘要
The mononuclear rearrangement of heterocycles (MRH) reaction of the Z-phenylhydrazone of 3-benzoyl-S-phenyl-1,2,4-oxadiazole into 4-benzoylamino-2,S-diphenyl-1,2,3-triazole derives a sizable rate enhancement in the 1-butyl-3-methylimidazolium tetrafluoroborate [BMIM] [BF4] ionic liquid as compared to the hexafluorophosphate-based [BMIM] PF6] and conventional organic solvents. However, the origin of the rate difference between [BMIM] BF4] and [BMIM] PF6] has proven difficult to rationalize as no experimental trend relates the physical properties of the solvents, e.g., polarity and viscosity, to the rates of reaction. QM/MM calculations in combination with free-energy perturbation theory and Monte Carlo sampling have been carried out for the MRH reaction to elucidate the disparities in rates when using ionic liquids, methanol, and acetonitrile. Activation barriers and solute-solvent interactions have been computed for both an uncatalyzed and a specific base-catalyzed mechanism. Energetic and structural analyses determined that favorable pi(+)-pi interactions between the BMIM cation, the substrate phenyl rings, and the bicyclic quasi-aromatic 10 pi oxadiazole/triazole transition region imposed a preordered geometric arrangement that enhanced the rate of reaction. An ionic liquid clathrate formation enforced a coplanar orientation of the phenyl rings that maximized the electronic effects exerted on the reaction route. In addition, site-specific electrostatic stabilization between the ions and the MRH substrate was more prevalent in [BMIM][BF4] as compared to [BMIM] [PF6].
引用
收藏
页码:10786 / 10796
页数:11
相关论文
共 50 条
  • [41] Polarization and charge-transfer effects in aqueous solution via ab initio QM/MM simulations
    Mo, YR
    Gao, JL
    JOURNAL OF PHYSICAL CHEMISTRY B, 2006, 110 (07): : 2976 - 2980
  • [42] Counteranion Effects on the Zirconocene Polymerization Catalyst Olefin Complex from QM/MM Molecular Dynamics Simulations
    Rowley, Christopher N.
    Woo, Tom K.
    ORGANOMETALLICS, 2011, 30 (08) : 2071 - 2074
  • [43] DIADORIM: a Monte Carlo Program for Liquid Simulations including Quantum Mechanics and Molecular Mechanics (QM/MM) Facilities: Applications to Liquid Ethanol
    Gomide Freitas, Luiz Carlos
    JOURNAL OF THE BRAZILIAN CHEMICAL SOCIETY, 2009, 20 (08) : 1541 - 1548
  • [44] Extracting dimer structures from simulations of organic-based materials using QM/MM methods
    Perez-Jimenez, A. J.
    Sancho-Garcia, J. C.
    CHEMICAL PHYSICS, 2015, 459 : 112 - 124
  • [45] Path integral simulations of proton transfer reactions in aqueous solution using combined QM/MM potentials
    Major, DT
    Garcia-Viloca, M
    Gao, JL
    JOURNAL OF CHEMICAL THEORY AND COMPUTATION, 2006, 2 (02) : 236 - 245
  • [46] Chemical Reactivity and Spectroscopy Explored From QM/MM Molecular Dynamics Simulations Using the LIO Code
    Marcolongo, Juan P.
    Zeida, Ari
    Semelak, Jonathan A.
    Foglia, Nicolas O.
    Morzan, Uriel N.
    Estrin, Dario A.
    Gonzalez Lebrero, Mariano C.
    Scherlis, Damian A.
    FRONTIERS IN CHEMISTRY, 2018, 6
  • [47] PHYS 267-How important is sampling in spectroscopic characterizations of metalloenzymes using QM/MM simulations?
    Yang, Shuo
    Riccardi, Demian
    Ghosh, Nilanjan
    Cui, Qiang
    ABSTRACTS OF PAPERS OF THE AMERICAN CHEMICAL SOCIETY, 2007, 234
  • [48] Development of a perturbative approach for Monte Carlo simulations using a hybrid ab initio QM/MM method
    Truong, TN
    Stefanovich, EV
    CHEMICAL PHYSICS LETTERS, 1996, 256 (03) : 348 - 352
  • [49] Solvent effects on the 1(n, π*)transition of formaldehyde in liquid water.: A QM/MM study using the mean field approximation
    Sánchez, ML
    Martín, ME
    Aguilar, MA
    del Valle, FJO
    CHEMICAL PHYSICS LETTERS, 1999, 310 (1-2) : 195 - 200
  • [50] Insights into the structure and dynamics of liquid water: A comparative study of conventional QM/MM and ONIOM-XS MD simulations
    Thaomola, Sukhontip
    Tongraar, Anan
    Kerdcharoen, Teerakiat
    JOURNAL OF MOLECULAR LIQUIDS, 2012, 174 : 26 - 33