Streptomyces chitinivorans sp nov., a chitinolytic strain isolated from estuarine lake sediment

被引:3
|
作者
Ray, Lopamudra [1 ,2 ]
Mishra, Samir Ranjan [1 ]
Panda, Ananta Narayan [1 ]
Das, Surajit [3 ]
Rastogi, Gurdeep [4 ]
Pattanaik, Ajit Kumar [2 ]
Adhya, Tapan Kumar [1 ]
Suar, Mrutyunjay [1 ]
Raina, Vishakha [1 ]
机构
[1] KIIT Univ, Sch Biotechnol, Bhubaneswar 751024, Odisha, India
[2] KIIT Univ, Sch Law, Bhubaneswar 751024, Odisha, India
[3] Natl Inst Technol, Dept Life Sci, Rourkela 769008, Odisha, India
[4] Chilika Dev Author, Wetland Res & Training Ctr, Balugaon 751014, Odisha, India
关键词
DNA-DNA HYBRIDIZATION; NUMERICAL CLASSIFICATION; SEQUENCE-ANALYSIS; LIPID-COMPOSITION; RAPID METHOD; IDENTIFICATION; DATABASE; PROPOSAL; SEARCH; NAMES;
D O I
10.1099/ijsem.0.001176
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
A novel actinobacterial strain RC1832(T) was isolated from the sediment of a fish dumping yard at Balugaon near Chilika Lake. The strain is halotolerant (15% NaCl, w/v), alkali-tolerant (pH 7-10) and hydrolyzes chitin, starch, gelatin, cellulose, carboxymethyl cellulose, Tween 80, tributyrin, lecithin and casein. Apart from showing typical genus-specific morphological and chemotaxonomic features, the comparision and analysis of the near complete 16S rRNA gene sequence clearly revealed that the strain RC1832(T) represented a member of the genus Streptomyces. It exhibited the highest sequence similarities with the strains Streptomyces fenghuangensis GIMN4.003(T) (99.78 %), Streptomyces nanhaiensis DSM 41926(T) (99.07 %), Streptomyces radiopugnans R97(T) (98.71 %), Streptomyces atacamensis DSM 42065(T) (98.65 %) and Streptomyces barkulensis DSM 42082(T) (98.25 %). The DNA-DNA relatedness of strain RC 1832(T) with the closest phylogenetic neighbours S. fenghuangensis GIMN4.003(T) and S. nanhaiensis DSM 41926(T) were 20 +/- 2% and 21 +/- 2 %, respectively. Thus, based on a range of phenotypic and genotypic properties, strain RC1832(T) was suggested to represent a novel species of the genus Streptomyces for which the name Streptomyces chitinivorans sp. nov. is proposed. The type strain is RC1832(T) (=JCM 30611=KCTC 29696).
引用
收藏
页码:3241 / 3248
页数:8
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