Predicting molecular dipole moments by combining atomic partial charges and atomic dipoles

被引:79
|
作者
Veit, Max [1 ]
Wilkins, David M. [1 ,3 ]
Yang, Yang [2 ]
DiStasio, Robert A., Jr. [2 ]
Ceriotti, Michele [1 ]
机构
[1] Ecole Polytech Fed Lausanne, Lab Computat Sci & Modeling, IMX, CH-1015 Lausanne, Switzerland
[2] Cornell Univ, Dept Chem & Chem Biol, Ithaca, NY 14853 USA
[3] Queens Univ Belfast, Atomist Simulat Ctr, Sch Math & Phys, Belfast BT7 1NN, Antrim, North Ireland
来源
JOURNAL OF CHEMICAL PHYSICS | 2020年 / 153卷 / 02期
基金
瑞士国家科学基金会; 欧洲研究理事会;
关键词
DISTRIBUTED MULTIPOLE ANALYSIS; ELECTROSTATIC POTENTIALS; DENSITY; FORMAMIDE;
D O I
10.1063/5.0009106
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070304 ; 081704 ;
摘要
The molecular dipole moment (mu) is a central quantity in chemistry. It is essential in predicting infrared and sum-frequency generation spectra as well as induction and long-range electrostatic interactions. Furthermore, it can be extracted directly-via the ground state electron density-from high-level quantum mechanical calculations, making it an ideal target for machine learning (ML). In this work, we choose to represent this quantity with a physically inspired ML model that captures two distinct physical effects: local atomic polarization is captured within the symmetry-adapted Gaussian process regression framework which assigns a (vector) dipole moment to each atom, while the movement of charge across the entire molecule is captured by assigning a partial (scalar) charge to each atom. The resulting "MuML" models are fitted together to reproduce molecular mu computed using high-level coupled-cluster theory and density functional theory (DFT) on the QM7b dataset, achieving more accurate results due to the physics-based combination of these complementary terms. The combined model shows excellent transferability when applied to a showcase dataset of larger and more complex molecules, approaching the accuracy of DFT at a small fraction of the computational cost. We also demonstrate that the uncertainty in the predictions can be estimated reliably using a calibrated committee model. The ultimate performance of the models-and the optimal weighting of their combination-depends, however, on the details of the system at hand, with the scalar model being clearly superior when describing large molecules whose dipole is almost entirely generated by charge separation. These observations point to the importance of simultaneously accounting for the local and non-local effects that contribute to mu; furthermore, they define a challenging task to benchmark future models, particularly those aimed at the description of condensed phases. Published under license by AIP Publishing.
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页数:14
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