Statistical basis and outputs of stable isotope mixing models: Comment on Fry (2013)

被引:32
|
作者
Semmens, Brice X. [1 ]
Ward, Eric J. [2 ]
Parnell, Andrew C. [3 ]
Phillips, Donald L. [4 ]
Bearhop, Stuart [5 ]
Inger, Richard [6 ]
Jackson, Andrew [7 ,8 ]
Moore, Jonathan W. [9 ]
机构
[1] Univ Calif San Diego, Scripps Inst Oceanog, La Jolla, CA 92039 USA
[2] NOAA, Conservat Biol Div, NW Fisheries Sci Ctr, Natl Marine Fisheries Serv, Seattle, WA 98112 USA
[3] Univ Coll Dublin, Complex & Adapt Syst Lab, Sch Math Sci Stat, Dublin, Ireland
[4] US EPA, Natl Hlth & Environm Effects Res Lab, Western Ecol Div, Corvallis, OR 97333 USA
[5] Univ Exeter, Sch Biosci, Ctr Ecol & Conservat, Exeter EX4 4SB, Devon, England
[6] Univ Exeter, Sch Biosci, Environm & Sustainabil Inst, Exeter EX4 4SB, Devon, England
[7] Univ Dublin Trinity Coll, Dept Zool, Sch Nat Sci, Dublin 2, Ireland
[8] Univ Dublin Trinity Coll, Ctr Biodivers Res, Dublin 2, Ireland
[9] Simon Fraser Univ, Earth Ocean Res Grp, Burnaby, BC V5A 1S6, Canada
关键词
Bayesian mixing model; SIAR; MixSIR; IsoSource; PRIOR INFORMATION; UNCERTAINTY; TOO;
D O I
10.3354/meps10535
中图分类号
Q14 [生态学(生物生态学)];
学科分类号
071012 ; 0713 ;
摘要
Fry (2013; Mar Ecol Prog Ser 472:1-13) reviewed approaches to solving underdetermined stable isotope mixing systems, and presented a novel approach based on graphical summaries. He inaccurately characterized the statistics and interpretation of outputs from IsoSource and more recent Bayesian mixing model tools (e. g. SIAR, MixSIR), however, and as an alternative promoted an approach-not based on likelihood methods-that uses graphing and 2 new metrics for tracking source contributions to a mixture. Fry's approach does not provide statistical probability densities associated with source contribution parameter estimates, has little applicability to complex mixing systems such as hierarchical models, and relies on the subjective interpretation of graphing products. We clarify the analytic theory underlying common mixing model approaches and provide an analysis of the 4-source, 2-tracer underdetermined mixing system example in Fry (2013), using both a Bayesian mixing model and Fry's graphical analysis and summary metrics. We demonstrate that properly interpreted Bayesian approaches yield distributions of parameter estimates that can reflect multi-modality, covariance and parameter uncertainty.
引用
收藏
页码:285 / 289
页数:5
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