Research Progress on Carbohydrate Active Enzymes (CAZYmes) Derived From Human Gut Microbiota

被引:0
|
作者
Zhang Hao-Wen [1 ]
Cao Hao [1 ]
Wang Yu-Lu [1 ]
Xin Feng-Jiao [1 ]
机构
[1] Chinese Acad Agr Sci, Inst Food Sci & Technol, Beijing 100193, Peoples R China
基金
中国博士后科学基金; 中国国家自然科学基金;
关键词
human gut microbiota; glycoside hydrolases; glycosyltransferases; polysaccharide lyases; carbohydrate esterases; auxiliary activities; FAMILY; 97; ENZYME; BACTEROIDES-THETAIOTAOMICRON; CATALYTIC MECHANISM; POLYSACCHARIDE LYASES; ALPHA-GALACTOSIDASE; GLYCOSYLTRANSFERASES; ESTERASES; DEGRADATION; BACTERIUM; INSIGHT;
D O I
10.16476/j.pibb.2020.0059
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
The human gut microbiota is a metabolic organ that plays an essential role in human health and disease. The molecular mechanisms of its involvement in processes such as host food digestion, immunity and brain function are the synergistic coupling of specific metabolic pathways between microorganism and human. Enzymes are the basic functional units that involved in the transformation of substances in the metabolic pathways. An in-depth look into the catalytic mechanisms of the enzymes encoded by human gut microbiota will provide a theoretical framework for exploring the interventions of precision nutrition and medicine targeting the human gut microbiota (or intestinal enzymes). Studies on enzymatic hydrolysis of specific substrates have shown that the human gut microbiota not only encodes all known families of carbohydrate active enzymes (CAZYmes), but also contains plenty of the potentially novel CAZYmes. This paper describes the principles of classification and catalytic properties of CAZYmes, and mainly reviews the research progresses on the crystal structures of novel CAZYmes derived from the human gut microbiota.
引用
收藏
页码:607 / 625
页数:19
相关论文
共 60 条
  • [41] Ndeh D, 2020, NAT COMMUN, V11, DOI 10.1038/s41467-020-14509-4
  • [42] Biochemistry of complex glycan depolymerisation by the human gut microbiota
    Ndeh, Didier
    Gilbert, Harry J.
    [J]. FEMS MICROBIOLOGY REVIEWS, 2018, 42 (02) : 146 - 164
  • [43] Complex pectin metabolism by gut bacteria reveals novel catalytic functions
    Ndeh, Didier
    Rogowski, Artur
    Cartmell, Alan
    Luis, Ana S.
    Basle, Arnaud
    Gray, Joseph
    Venditto, Immacolata
    Briggs, Jonathon
    Zhang, Xiaoyang
    Labourel, Aurore
    Terrapon, Nicolas
    Buffetto, Fanny
    Nepogodiev, Sergey
    Xiao, Yao
    Field, Robert A.
    Zhu, Yanping
    O'Neill, Malcolm A.
    Urbanowicz, Breeanna R.
    York, William S.
    Davies, Gideon J.
    Abbott, D. Wade
    Ralet, Marie-Christine
    Martens, Eric C.
    Henrissat, Bernard
    Gilbert, Harry J.
    [J]. NATURE, 2017, 544 (7648) : 65 - +
  • [44] Catalytic Mechanism of Retaining α-Galactosidase Belonging to Glycoside Hydrolase Family 97
    Okuyama, Masayuki
    Kitamura, Momoyo
    Hondoh, Hironori
    Kang, Min-Sun
    Mori, Haruhide
    Kimura, Atsuo
    Tanaka, Isao
    Yao, Min
    [J]. JOURNAL OF MOLECULAR BIOLOGY, 2009, 392 (05) : 1232 - 1241
  • [45] Inverse control of Rab proteins by Yersinia ADP-ribosyltransferase and glycosyltransferase related to clostridial glucosylating toxins
    Ost, G. Stefan
    Wirth, Christophe
    Bogdanovic, Xenia
    Kao, Wei-Chun
    Schorch, Bjoern
    Aktories, Philipp J. K.
    Papatheodorou, Panagiotis
    Schwan, Carsten
    Schlosser, Andreas
    Jank, Thomas
    Hunte, Carola
    Aktories, Klaus
    [J]. SCIENCE ADVANCES, 2020, 6 (11):
  • [46] Structures of Complexes of a Metal-independent Glycosyltransferase GT6 from Bacteroides ovatus with UDP-N-Acetylgalactosamine (UDP-GalNAc) and Its Hydrolysis Products
    Pham, Tram T. K.
    Stinson, Brittany
    Thiyagarajan, Nethaji
    Lizotte-Waniewski, Michelle
    Brew, Keith
    Acharya, K. Ravi
    [J]. JOURNAL OF BIOLOGICAL CHEMISTRY, 2014, 289 (12) : 8041 - 8050
  • [47] Glycan complexity dictates microbial resource allocation in the large intestine
    Rogowski, Artur
    Briggs, Jonathon A.
    Mortimer, Jennifer C.
    Tryfona, Theodora
    Terrapon, Nicolas
    Lowe, Elisabeth C.
    Basle, Arnaud
    Morland, Carl
    Day, Alison M.
    Zheng, Hongjun
    Rogers, Theresa E.
    Thompson, Paul
    Hawkins, Alastair R.
    Yadav, Madhav P.
    Henrissat, Bernard
    Martens, Eric C.
    Dupree, Paul
    Gilbert, Harry J.
    Bolam, David N.
    [J]. NATURE COMMUNICATIONS, 2015, 6
  • [48] Formation of a Covalent Glycosyl-Enzyme Species in a Retaining Glycosyltransferase
    Rojas-Cervellera, Victor
    Ardevol, Albert
    Boero, Mauro
    Planas, Antoni
    Rovira, Carme
    [J]. CHEMISTRY-A EUROPEAN JOURNAL, 2013, 19 (42) : 14018 - 14023
  • [49] Dietary Carbohydrate Constituents Related to Gut Dysbiosis and Health
    Seo, Ye Seul
    Lee, Hye-Bin
    Kim, Yoonsook
    Park, Ho-Young
    [J]. MICROORGANISMS, 2020, 8 (03)
  • [50] Characterization of novel α-galactosidase in glycohydrolase family 97 from Bacteroides thetaiotaomicron and its immobilization for industrial application
    Shin, Yu-Jeong
    Woo, Seung-Hye
    Jeong, Hyun-Mo
    Kim, Ji-Soo
    Ko, M-Seul
    Jeong, Woon
    Lee, Jung-Hoon
    Shim, Jae-Hoon
    [J]. INTERNATIONAL JOURNAL OF BIOLOGICAL MACROMOLECULES, 2020, 152 : 727 - 734