Development of Peptide Nucleic Acid Probes for Detection of the HER2 Oncogene

被引:14
|
作者
Metaferia, Belhu [1 ]
Wei, Jun S. [1 ]
Song, Young K. [1 ]
Evangelista, Jennifer [3 ]
Aschenbach, Konrad [3 ]
Johansson, Peter [1 ]
Wen, Xinyu [1 ,2 ]
Chen, Qingrong [1 ]
Lee, Albert [1 ]
Hempel, Heidi [1 ]
Gheeya, Jinesh S. [1 ]
Getty, Stephanie [4 ]
Gomez, Romel [3 ]
Khan, Javed [1 ]
机构
[1] NCI, Pediat Oncol Branch, NIH, Bethesda, MD 20892 USA
[2] NCI, Adv Biomed Comp Ctr, SAIC Frederick Inc, Frederick, MD 21701 USA
[3] Univ Maryland, Dept Elect & Comp Engn, College Pk, MD 20742 USA
[4] NASA, Goddard Space Flight Ctr, Greenbelt, MD 20771 USA
来源
PLOS ONE | 2013年 / 8卷 / 04期
基金
美国国家卫生研究院;
关键词
HYBRIDIZATION; DNA; PNA; IMMOBILIZATION; STABILITY; PNA/DNA;
D O I
10.1371/journal.pone.0058870
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
Peptide nucleic acids (PNAs) have gained much interest as molecular recognition tools in biology, medicine and chemistry. This is due to high hybridization efficiency to complimentary oligonucleotides and stability of the duplexes with RNA or DNA. We have synthesized 15/16-mer PNA probes to detect the HER2 mRNA. The performance of these probes to detect the HER2 target was evaluated by fluorescence imaging and fluorescence bead assays. The PNA probes have sufficiently discriminated between the wild type HER2 target and the mutant target with single base mismatches. Furthermore, the probes exhibited excellent linear concentration dependence between 0.4 to 400 fmol for the target gene. The results demonstrate potential application of PNAs as diagnostic probes with high specificity for quantitative measurements of amplifications or over-expressions of oncogenes.
引用
收藏
页数:7
相关论文
共 50 条
  • [41] Controlling conformation in peptide nucleic acids for nucleic acid detection
    Appella, Daniel H.
    ABSTRACTS OF PAPERS OF THE AMERICAN CHEMICAL SOCIETY, 2014, 247
  • [42] The role of linoleic acid metabolism in the proliferative response of cells overexpressing the erbB-2/HER2 oncogene
    Glasgow, WC
    Everhart, AL
    EICOSANOIDS AND OTHER BIOACTIVE LIPIDS IN CANCER, INFLAMMATION, AND RADIATION INJURY 3, 1997, 407 : 393 - 397
  • [43] Gold nanoparticle probes for the detection of nucleic acid targets
    Thaxton, CS
    Georganopoulou, DG
    Mirkin, CA
    CLINICA CHIMICA ACTA, 2006, 363 (1-2) : 120 - 126
  • [44] STRATEGIES FOR LABELING AND DETECTION OF NUCLEIC-ACID PROBES
    LANDERS, TA
    PROCEEDINGS OF THE INTERNATIONAL SYMPOSIUM ON THE FORENSIC ASPECTS OF DNA ANALYSIS, 1989, : 63 - 75
  • [45] NONRADIOACTIVE LABELING AND DETECTION OF NUCLEIC-ACID PROBES
    SEIBL, R
    HOLTKE, J
    KESSLER, C
    MATTES, R
    JOURNAL OF CLINICAL CHEMISTRY AND CLINICAL BIOCHEMISTRY, 1987, 25 (09): : 577 - 577
  • [46] An Electrochemical Immunoassay for HER2 Detection
    Al-Khafaji, Q. A. M.
    Harris, M.
    Tombelli, S.
    Laschi, S.
    Turner, A. P. F.
    Mascini, M.
    Marrazza, G.
    ELECTROANALYSIS, 2012, 24 (04) : 735 - 742
  • [47] Molecular design of peptide nucleic acid amphiphiles as self-assembled probes for electrophoretic miRNA detection
    Schneider, James
    Armitage, Bruce
    Ly, Danith
    Goldman, Johnathan
    ABSTRACTS OF PAPERS OF THE AMERICAN CHEMICAL SOCIETY, 2015, 249
  • [48] Rapid detection, identification, and enumeration of Pseudomonas aeruginosa in bottled water using peptide nucleic acid probes
    Stender, H
    Broomer, A
    Oliveira, K
    Perry-O'Keefe, H
    Hyldig-Nielsen, JJ
    Sage, A
    Young, B
    Coull, J
    JOURNAL OF MICROBIOLOGICAL METHODS, 2000, 42 (03) : 245 - 253
  • [49] SNP detection using peptide nucleic acid probes and conjugated polymers: Applications in neurodegenerative disease identification
    Gaylord, BS
    Massie, MR
    Feinstein, SC
    Bazan, GC
    PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2005, 102 (01) : 34 - 39
  • [50] Detection of target DNA using fluorescent cationic polymer and peptide nucleic acid probes on solid support
    Frédéric R Raymond
    Hoang-Anh Ho
    Régis Peytavi
    Luc Bissonnette
    Maurice Boissinot
    François J Picard
    Mario Leclerc
    Michel G Bergeron
    BMC Biotechnology, 5