The Cancer Epidemiology Descriptive Cohort Database: A Tool to Support Population-Based Interdisciplinary Research

被引:0
|
作者
Kennedy, Amy E. [1 ]
Khoury, Muin J. [2 ]
Ioannidis, John P. A. [3 ,4 ,5 ,6 ]
Brotzman, Michelle [7 ]
Miller, Amy [7 ]
Lane, Crystal [8 ]
Lai, Gabriel Y. [1 ]
Rogers, Scott D. [1 ]
Harvey, Chinonye [1 ]
Elena, Joanne W. [1 ]
Seminara, Daniela [9 ]
机构
[1] NCI, Epidemiol & Genom Res Program, Div Canc Control & Populat Sci, NIH, Rockville, MD USA
[2] Ctr Dis Control & Prevent, Off Publ Hlth Genom, Atlanta, GA USA
[3] Stanford Univ, Dept Med, Stanford, CA 94305 USA
[4] Stanford Univ, Dept Hlth Res & Policy, Stanford, CA 94305 USA
[5] Stanford Univ, Dept Stat, Stanford, CA 94305 USA
[6] Stanford Univ, Meta Res Innovat Ctr Stanford METRICS, Stanford, CA 94305 USA
[7] Westat Corp, Rockville, MD USA
[8] US Hlth Resources & Serv Adm, Off Epidemiol & Res, Maternal & Child Hlth Bur, Rockville, MD 20857 USA
[9] NCI, Div Canc Control & Populat Sci, NIH, Rockville, MD USA
关键词
GENOME-WIDE ASSOCIATION; PRECISION MEDICINE; RISK; TRIALS; TRANSFORMATION; BREAST; LOCUS; GENE;
D O I
10.1158/1055-9965.EPI-16-0412
中图分类号
R73 [肿瘤学];
学科分类号
100214 ;
摘要
Background: We report on the establishment of a web-based Cancer Epidemiology Descriptive Cohort Database (CEDCD). The CEDCD's goals are to enhance awareness of resources, facilitate interdisciplinary research collaborations, and support existing cohorts for the study of cancer-related outcomes. Methods: Comprehensive descriptive data were collected from large cohorts established to study cancer as primary outcome using a newly developed questionnaire. These included an inventory of baseline and follow-up data, biospecimens, genomics, policies, and protocols. Additional descriptive data extracted from publicly available sources were also collected. This information was entered in a searchable and publicly accessible database. We summarized the descriptive data across cohorts and reported the characteristics of this resource. Results: As of December 2015, the CEDCD includes data from 46 cohorts representing more than 6.5 million individuals (29% ethnic/racial minorities). Overall, 78% of the cohorts have collected blood at least once, 57% at multiple time points, and 46% collected tissue samples. Genotyping has been performed by 67% of the cohorts, while 46% have performed whole-genome or exome sequencing in subsets of enrolled individuals. Information on medical conditions other than cancer has been collected in more than 50% of the cohorts. More than 600,000 incident cancer cases and more than 40,000 prevalent cases are reported, with 24 cancer sites represented. Conclusions: The CEDCD assembles detailed descriptive information on a large number of cancer cohorts in a searchable database. Impact: Information from the CEDCD may assist the interdisciplinary research community by facilitating identification of well-established population resources and large-scale collaborative and integrative research. (C) 2016 AACR.
引用
收藏
页码:1392 / 1401
页数:10
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