Genome sequence and description of Alistipes senegalensis sp nov.

被引:0
|
作者
Mishra, Ajay Kumar [1 ]
Gimenez, Gregory [1 ]
Lagier, Jean-Christophe [1 ]
Robert, Catherine [1 ]
Raoult, Didier [1 ]
Fournier, Pierre-Edouard [1 ]
机构
[1] Aix Marseille Univ, Fac Med, Unite Rech Malad Infect & Tropicales Emergentes, Marseille, France
来源
STANDARDS IN GENOMIC SCIENCES | 2012年 / 6卷 / 03期
关键词
Alistipes senegalensis; genome; BACTEROIDES-PUTREDINIS; BACTERIA;
D O I
10.4056/sigs.2625821
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
Alistipes senegalensis strain JC50(T) is the type strain of A. senegalensis sp. nov., a new species within the Alistipes genus. This strain, whose genome is described here, was isolated from the fecal flora of an asymptomatic patient. A. senegalensis is an anaerobic Gram-negative rod-shaped bacterium. Here we describe the features of this organism, together with the complete genome sequence and annotation. The 4,017,609 bp long genome (1 chromosome, but no plasmid) contains 3,113 protein-coding and 50 RNA genes, including 5 rRNA genes.
引用
收藏
页码:304 / 314
页数:11
相关论文
共 50 条
  • [1] Genome sequence and description of Alistipes senegalensis sp. nov.
    Ajay Kumar Mishra
    Gregory Gimenez
    Jean-Christophe Lagier
    Catherine Robert
    Didier Raoult
    Pierre-Edouard Fournier
    Standards in Genomic Sciences, 2012, 6 : 304 - 314
  • [2] Non-contiguous finished genome sequence and description of Alistipes ihumii sp nov.
    Pfleiderer, Anne
    Mishra, Ajay Kumar
    Lagier, Jean-Christophe
    Robert, Catherine
    Caputo, Aurelia
    Raoult, Didier
    Fournier, Pierre-Edouard
    STANDARDS IN GENOMIC SCIENCES, 2014, 9 (03): : 1221 - 1235
  • [3] Non-contiguous finished genome sequence and description of Alistipes timonensis sp nov.
    Lagier, Jean-Christophe
    Armougom, Fabrice
    Mishra, Ajay Kumar
    Thi-Tien Nguyen
    Raoult, Didier
    Fournier, Pierre-Edouard
    STANDARDS IN GENOMIC SCIENCES, 2012, 6 (03): : 315 - 324
  • [4] Non-contiguous finished genome sequence and description of Alistipes ihumii sp. nov.
    Anne Pfleiderer
    Ajay Kumar Mishra
    Jean-Christophe Lagier
    Catherine Robert
    Aurelia Caputo
    Didier Raoult
    Pierre-Edouard Fournier
    Standards in Genomic Sciences, 2014, 9 : 1221 - 1235
  • [5] Non contiguous-finished genome sequence and description of Alistipes obesi sp. nov.
    Perrine Hugon
    Dhamodharan Ramasamy
    Jean-Christophe Lagier
    Romain Rivet
    Carine Couderc
    Didier Raoult
    Pierre-Edouard Fournier
    Standards in Genomic Sciences, 2013, 7 : 427 - 439
  • [6] Non contiguous-finished genome sequence and description of Peptoniphilus senegalensis sp nov.
    Mishra, Ajay Kumar
    Lagier, Jean-Christophe
    Thi-Tien Nguyen
    Raoult, Didier
    Fournier, Pierre-Edouard
    STANDARDS IN GENOMIC SCIENCES, 2013, 7 (03): : 370 - 381
  • [7] Non-contiguous finished genome sequence and description of Paenibacillus senegalensis sp nov.
    Mishra, Ajay Kumar
    Lagier, Jean-Christophe
    Rivet, Romain
    Raoult, Didier
    Fournier, Pierre-Edouard
    STANDARDS IN GENOMIC SCIENCES, 2012, 7 (01): : 70 - 81
  • [8] Non-contiguous finished genome sequence and description of Anaerococcus senegalensis sp nov.
    Lagier, Jean-Christophe
    El Karkouri, Khalid
    Thi-Tien Nguyen
    Armougom, Fabrice
    Raoult, Didier
    Fournier, Pierre-Edouard
    STANDARDS IN GENOMIC SCIENCES, 2012, 6 (01): : 116 - 125
  • [9] Non-contiguous finished genome sequence and description of Kurthia senegalensis sp nov.
    Roux, Veronique
    Lagier, Jean-Christophe
    Gorlas, Aurore
    Robert, Catherine
    Raoult, Didier
    STANDARDS IN GENOMIC SCIENCES, 2014, 9 (03): : 1319 - 1230
  • [10] Non-contiguous finished genome sequence and description of Bartonella senegalensis sp nov.
    Mediannikov, Oleg
    El Karkouri, Khalid
    Diatta, Georges
    Robert, Catherine
    Fournier, Pierre-Edouard
    Raoult, Didier
    STANDARDS IN GENOMIC SCIENCES, 2013, 8 (02): : 279 - 289