Structure and intrinsic disorder of the proteins of the Trypanosoma brucei editosome

被引:5
|
作者
Czerwoniec, Anna [1 ]
Kasprzak, Joanna M. [1 ,2 ]
Bytner, Patrycja [1 ]
Dobrychlop, Mateusz [1 ]
Bujnicki, Janusz M. [1 ,2 ]
机构
[1] Adam Mickiewicz Univ, Inst Mol Biol & Biotechnol, PL-61614 Poznan, Poland
[2] Int Inst Mol & Cell Biol, Lab Bioinformat & Prot Engn, PL-02109 Warsaw, Poland
基金
欧洲研究理事会;
关键词
Editosome; RNA editing; Intrinsic disorder; Protein-RNA binding; Protein Structure Prediction; GUIDE RNA MOLECULES; EDITING COMPLEX; MESSENGER-RNA; META-SERVER; KINETOPLASTID MITOCHONDRIA; TARGETING SEQUENCES; PREDICTION; MODEL; FOLD; RECOGNITION;
D O I
10.1016/j.febslet.2015.07.026
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Mitochondrial pre-mRNAs in trypanosomatids undergo RNA editing to be converted into translatable mRNAs. The reaction is characterized by the insertion and deletion of uridine residues and is catalyzed by a macromolecular protein complex called the editosome. Despite intensive research, structural information for the majority of editosome proteinsis still missing and no high resolution structure for the editosome exists. Here we present a comprehensive structural bioinformatics analysis of all proteins of the Trypanosoma brucei editosome. We specifically focus on the interplay between intrinsic order and disorder. According to computational predictions, editosome proteins involved in the basal reaction steps of the processing cycle are mostly ordered. By contrast, thirty percent of the amino acid content of the editosome is intrinsically disordered, which includes most prominently proteins with OB-fold domains. Based on the data we suggest a functional model, in which the structurally disordered domains of the complex are correlated with the RNA binding and RNA unfolding activity of the T. brucei editosome. (C) 2015 Federation of European Biochemical Societies. Published by Elsevier B.V. All rights reserved.
引用
收藏
页码:2603 / 2610
页数:8
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