Transcription factor-based biosensors for screening and dynamic regulation

被引:22
|
作者
Tellechea-Luzardo, Jonathan [1 ]
Stiebritz, Martin T. [1 ]
Carbonell, Pablo [1 ,2 ]
机构
[1] Univ Politecn Valencia UPV, Inst Ind Control Syst & Comp AI2, Valencia, Spain
[2] Univ Valencia, Inst Integrat Syst Biol I2SysBio, CSIC, Paterna, Spain
关键词
allosteric transcription factors; biosensors; screening; dynamic regulation; metabolic engineering; FACTOR-BINDING; ESCHERICHIA-COLI; SHEWANELLA-ONEIDENSIS; SYNTHETIC BIOLOGY; GENETIC-CONTROL; SMALL MOLECULES; DESIGN; DATABASE; PATHWAY; PROTEIN;
D O I
10.3389/fbioe.2023.1118702
中图分类号
Q81 [生物工程学(生物技术)]; Q93 [微生物学];
学科分类号
071005 ; 0836 ; 090102 ; 100705 ;
摘要
Advances in synthetic biology and genetic engineering are bringing into the spotlight a wide range of bio-based applications that demand better sensing and control of biological behaviours. Transcription factor (TF)-based biosensors are promising tools that can be used to detect several types of chemical compounds and elicit a response according to the desired application. However, the wider use of this type of device is still hindered by several challenges, which can be addressed by increasing the current metabolite-activated transcription factor knowledge base, developing better methods to identify new transcription factors, and improving the overall workflow for the design of novel biosensor circuits. These improvements are particularly important in the bioproduction field, where researchers need better biosensor-based approaches for screening production-strains and precise dynamic regulation strategies. In this work, we summarize what is currently known about transcription factor-based biosensors, discuss recent experimental and computational approaches targeted at their modification and improvement, and suggest possible future research directions based on two applications: bioproduction screening and dynamic regulation of genetic circuits.
引用
收藏
页数:16
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