Structure elucidation, DFT and IRI computational investigations of a novel 4-(3-(4-chlorophenyl)-1-phenyl-1H-pyrazol-4-yl)2,6-dimethyl-1,4-dihydropyridine-3,5-dicarbonitrile

被引:5
|
作者
Sreenatha, N. R. [1 ]
Prasad, T. N. Mahadeva [2 ]
Harish, M. [3 ]
Chakravarthy, A. S. Jeevan [4 ,8 ]
Chandana, S. N. [5 ,7 ]
Puneetha, G. K. [6 ]
Nagaraju, S. [7 ]
Lakshminarayana, B. N. [7 ]
机构
[1] Govt Engn Coll, Dept Phys, Chamarajanagara 571313, Karnataka, India
[2] Govt First Grade Coll, Dept Phys, Gundlupet 571111, Karnataka, India
[3] Govt Engn Coll, Dept Phys, Ramanagara 562159, Karnataka, India
[4] Jawaharlal Nehru Ctr Adv Sci Res, New Chem Unit, Bangalore 560064, Karnataka, India
[5] Rajeev Inst Technol, Dept Phys, Hassan 573201, Karnataka, India
[6] Univ Mysore, Yuvarajas Coll, Dept Bot, Mysore, Karnataka, India
[7] Adichunchanagiri Inst Technol, Dept Phys, Chikkamagaluru 577102, Karnataka, India
[8] BMSIT&M, Dept Chem, Doddaballapur Main Rd, Bengaluru 560064, Karnataka, India
关键词
Single crystal XRD; Computation analysis; HOMO-LUMO; NBO analysis; RDG; IRI; Molecular docking; HIRSHFELD SURFACE-ANALYSIS; CRYSTAL-STRUCTURE; MOLECULAR-STRUCTURE; INTERMOLECULAR INTERACTIONS; CRYSTALEXPLORER; VISUALIZATION; ANTAGONISTS; ENERGIES; MODEL;
D O I
10.1016/j.molstruc.2023.137048
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070304 ; 081704 ;
摘要
A novel symmetric dihydropyridine possessing cyano group at C11 and C14 has been synthesized using a modified Hantzsch method. The compound (C24H18ClN5) was characterized spectroscopically by Mass, IR and 1H NMR methods and finally confirmed by X-ray diffraction study. The compound crystallizes in a monoclinic crystal class with P2(1/c) space group. In the title molecule, the dihydropyridine ring is puckered and displayed an envelope conformation of the type E-1. The solid state of the title compound is governed by an intermolecular C-H center dot center dot center dot N, C-H center dot center dot center dot Cl and C-H center dot center dot center dot pi interactions in the building of a crystal. It is investigated by three dimensional Hirshfeld surfaces mapped on different properties, also the relevant fingerprint graphs are obtained to recognize the percentage contribution from various inter atomic contacts. The topology of three dimensional interaction energy frameworks were constructed using the energy density wave function of DFT/B3LYP/6-311++G(d,p) and the energy corresponding to intermolecular interactions were assessed. The density functional theory analysis has been carried out and hence an energy gap and global index parameters are evaluated, also the geometric parameters are computed by optimizing the molecular structure of the title compound. The natural bonding orbitals (NBO) analysis is carried out to know the intermolecular charge transfer in the molecule. Reduced density gradients (RDG) and interaction region indicators (IRI) analysis reveals the chemical bonding and weak interactions regions. The molecular docking has been performed on 1B38, 2OHM, 3VNT and 4URO receptors shows good binding affinities and their results reveal that it serves as potential anti-cancer agent.
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页数:11
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