An Updated Trial Sequential Meta-analysis of Vitamin D Receptor Gene Polymorphism (Fok1, Bsm1, Taq1 and Apa1) and Risk to Tuberculosis

被引:6
|
作者
Shah, Srishti [1 ]
Priyanka [2 ]
Sharma, Sadhna [2 ,3 ]
机构
[1] Natl Inst Sci Educ & Res, Bhubaneswar, India
[2] Univ Delhi, Dept Zool, DS Kothari Cent Facil Interdisciplinary Res DSKC, Miranda House, Delhi 110007, India
[3] Univ Delhi, Dept Zool, Miranda House, Delhi 110007, India
关键词
Tuberculosis; Single nucleotide polymorphism (SNP); Vitamin D receptor (VDR); Meta-analysis; Trial sequential analysis; PULMONARY TUBERCULOSIS; MYCOBACTERIUM-TUBERCULOSIS; SUSCEPTIBILITY; VDR; ASSOCIATION; SECRETION; GROWTH; CELL;
D O I
10.1007/s12291-022-01091-3
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Vitamin D receptor (VDR) is one of the most widely studied genes for the Tuberculosis (TB) susceptibility. Several studies have been conducted to establish some association between them but most of the time they are contradictory and underpowered. So, a trial sequential meta-analysis between VDR gene polymorphisms and TB susceptibility can provide a better understanding of the relationship. A meta-analysis was carried out using a total of 17 case-control studies which includes Fok1 (14 Studies), Bsm1 (8 Studies), Apa1 (8 Studies) and Taq1 (12 Studies) polymorphisms in the VDR gene searched from Pubmed and Google Scholar. Pooled Odds Ratio (OR) and 95% Confidence Interval (CI) were calculated using StatsDirect Version 3, using random effects model. Trial sequential analysis (TSA) was also performed to assess if the statistical significance of the meta-analysis was within monitoring boundaries. It was found that the individuals with BB genotype of Bsm1 polymorphism with OR = 0.713 (95%CI = 0.521, 0.974; p value < 0.05) and FF genotype of Fok1 polymorphism with pooled OR = 0.716 (95%CI = 0.523, 0.979; p value < 0.05) had decreased incidence of TB. Also, the aa genotype of Apa1 gene polymorphism increases susceptibility to TB with pooled OR = 1.997 (95%CI = 1.121, 3.558; p value < 0.05). All these analyses reached the required information size through TSA analysis. No statistically significant result was found for Taq1 polymorphisms and TB susceptibility. VDR polymorphisms in Fok1 and Bsm1 played protective roles against development of TB infection, while Apa1 appeared to have a significant association to TB susceptibility.
引用
收藏
页码:60 / 72
页数:13
相关论文
共 50 条
  • [41] Influence of Vitamin D Receptor Gene Fok1 Polymorphism on Bone Mass Accrual Post Calcium and Vitamin D Supplementation
    Neha Sanwalka
    Anuradha Khadilkar
    Shashi Chiplonkar
    Kavita Khatod
    Nikhil Phadke
    Vaman Khadilkar
    The Indian Journal of Pediatrics, 2015, 82 : 985 - 990
  • [42] Role of vitamin D receptor gene Cdx2 and Apa1 polymorphisms in prostate cancer susceptibility: a meta-analysis
    Wang, Kewei
    Wu, Guosheng
    Li, Jinping
    Song, Wentao
    BMC CANCER, 2016, 16
  • [43] Bsm1 Gene polymorphism of the vitamin D receptor in breast cancer patients: influence of obesity and relevant drugs
    Haikal N.M.A.
    El-Hussiny M.A.-B.
    Farouk O.
    Abo Hashem E.M.
    Comparative Clinical Pathology, 2017, 26 (1) : 127 - 134
  • [44] Vitamin D receptor Fok1 polymorphism and invasive ovarian carcinoma risk - A case-control study
    Arumugam, Meenakshi
    Sonkusare, Shipra
    Goripalli, Shreeja
    Shivappa, Pooja
    Shetty, Prashanth
    Kumari, Suchetha N.
    GENE, 2021, 768
  • [45] Vitamin D receptor gene Fok1 polymorphism predicts calcium absorption and bone mineral density in children
    Ames, SK
    Ellis, KJ
    Gunn, SK
    Copeland, KC
    Abrams, SA
    JOURNAL OF BONE AND MINERAL RESEARCH, 1999, 14 (05) : 740 - 746
  • [46] 1,25-Dihydroxyvitamin D and the Vitamin D Receptor Gene Polymorphism Apa1 Influence Bone Mineral Density in Primary Hyperparathyroidism
    Christensen, Monika H. E.
    Apalset, Ellen M.
    Nordbo, Yngve
    Varhaug, Jan Erik
    Mellgren, Gunnar
    Lien, Ernst A.
    PLOS ONE, 2013, 8 (02):
  • [47] The vitamin D receptor gene polymorphism Apa1 influences bone mineral density in patients with primary hyperparathyroidism
    Lien, E. A.
    Mellgren, G.
    Christensen, M. H. E.
    EXPERIMENTAL AND CLINICAL ENDOCRINOLOGY & DIABETES, 2014, 122 (03)
  • [48] VITAMIN D DEFICIENCY AND RS731236(TAQ1) VITAMIN D RECEPTOR GENE POLYMORPHISM AS POSSIBLE RISK FACTORS FOR RHEUMATOID ARTHRITIS AND OSTEOARTHRITIS
    Mahmoud, Sameer Ahmed Al Haj
    Atoum, Manar Fayiz
    Al-Hourani, Huda Mustafa
    Bateineh, Sajedah
    Abderrahman, Salim
    Alzoughool, Foad
    ACTA MEDICA MEDITERRANEA, 2018, 34 (01): : 209 - 213
  • [49] Investigating the association between FOK1 polymorphism in the vitamin D receptor (VDR) gene and type 2 diabetes prevalence: A comprehensive analysis
    Martinelli, Romina P.
    Petroni, Candela
    Martinez, Josefina
    Cuesta, Cristina
    Esteban, Luis
    Pacchioni, Alejandra M.
    Arias, Pablo
    JOURNAL OF STEROID BIOCHEMISTRY AND MOLECULAR BIOLOGY, 2025, 248
  • [50] Polymorphisms in IL-1β, vitamin D receptor Fok1, and Toll-like receptor 2 are associated with extrapulmonary tuberculosis
    Motsinger-Reif, Alison A.
    Antas, Paulo R. Z.
    Oki, Noffisat O.
    Levy, Shawn
    Holland, Steven M.
    Sterling, Timothy R.
    BMC MEDICAL GENETICS, 2010, 11