Necroptosis Related Genes Predict Prognosis and Therapeutic Potential in Gastric Cancer

被引:5
|
作者
Wu, Nandie [1 ]
Liu, Fangcen [2 ]
Huang, Ying [3 ,4 ]
Su, Xinyu [5 ]
Zhang, Yaping [6 ]
Yu, Lixia [5 ]
Liu, Baorui [1 ,3 ]
机构
[1] Nanjing Med Univ, Comprehens Canc Ctr, Clin Coll, Nanjing Drum Tower Hosp, Nanjing 210009, Peoples R China
[2] Nanjing Univ, Drum Tower Hosp, Dept Pathol, Med Sch, Nanjing 210009, Peoples R China
[3] Nanjing Univ Chinese Med, Comprehens Canc Ctr, Clin Coll Tradit Chinese & Western Med, Nanjing Drum Tower Hosp, Nanjing 210009, Peoples R China
[4] Second Peoples Hosp Huaian, Dept Oncol, Huaian 223022, Peoples R China
[5] Nanjing Univ, Comprehens Canc Ctr, Affiliated Hosp, Med Sch,Nanjing Drum Tower Hosp, Nanjing 210009, Peoples R China
[6] Xuzhou Med Univ, Comprehens Canc Ctr, Nanjing Drum Tower Hosp, Clin Coll, Nanjing 210009, Peoples R China
基金
中国国家自然科学基金;
关键词
gastric cancer; necroptosis; immune cell infiltration; immune microenvironment; glycolysis; drug response; CELL-METABOLISM; TUMOR; CHEMOTHERAPY; SURVIVAL;
D O I
10.3390/biom13010101
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
The clinical significance of necroptosis in gastric cancer (GC) has yet to be fully elucidated. The purpose of our study was to identify a necroptosis-relevant gene and to establish a prediction model to estimate the prognosis and therapeutic potential in GC. Here, we explored the expression profile of 76 necroptosis-related genes in TCGA-STAD patients. A six-gene risk score prediction model was established via regression analysis of the least absolute shrinkage and selection operator (LASSO) and validated in a separate cohort. Patients were separated into low- or high-risk groups according to the median risk score. We then compared and analyzed the biological process characteristics of two risk groups. Additionally, cell-to-cell communications and metabolic activity were analyzed in a single-cell solution. The in vitro experiments were conducted to explore the biological functions and drug sensitivity of necroptosis-related genes in gastric cancer. Our results identified that compared with the low-risk group, the high-risk group was associated with a higher clinical stage or grade and a worse prognosis. In addition, the low-risk group had higher levels of immunity and immune cell infiltration. Necroptosis was triggered by the TNF pathway in myeloid cells and the glycolysis pathway was altered. Necroptosis-related genes modulated the cell function, including proliferation and migration in vitro. Furthermore, the potential drugs' sensitivity was higher in the low-risk subgroup. These findings could facilitate a better understanding and improve the treatment potential and prognosis of GC patients.
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页数:20
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